Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 AP002833.3-201ENST00000625075 2265 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC007342.7-201ENST00000624610 2337 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SOX4Q06945 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SOX4Q06945 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 KARSP1-201ENST00000451871 1752 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
SOX4Q06945 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SOX4Q06945 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX4Q06945 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SOX4Q06945 SNORA72.1-201ENST00000363485 129 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 RNU6-259P-201ENST00000383999 107 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 RNU2-41P-201ENST00000410991 178 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 RPL26P37-201ENST00000411983 438 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC027644.1-201ENST00000419595 298 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 AL157884.1-201ENST00000424561 454 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 RPSAP65-201ENST00000429660 595 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC094019.1-201ENST00000434678 472 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 MTND4LP16-201ENST00000440828 295 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 AL353898.1-201ENST00000444055 238 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX4Q06945 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX4Q06945 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX4Q06945 WBP1LP4-201ENST00000505043 344 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 AC090071.1-201ENST00000507713 644 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 AC010587.2-201ENST00000511727 448 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX4Q06945 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX4Q06945 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX4Q06945 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SOX4Q06945 CENPUP2-201ENST00000555897 1186 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX4Q06945 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 MIR3912-201ENST00000577566 105 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX4Q06945 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX4Q06945 AP001267.4-201ENST00000602598 545 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX4Q06945 AC073592.6-201ENST00000624271 415 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 TMEM75-201ENST00000624314 2165 ntBASIC6.9□□□□□ -1.3
SOX4Q06945 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SOX4Q06945 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SOX4Q06945 CAP1P2-201ENST00000417455 1409 ntBASIC6.9□□□□□ -1.31
SOX4Q06945 AC107980.1-201ENST00000558671 3355 ntBASIC6.9□□□□□ -1.31
SOX4Q06945 AL449283.1-201ENST00000602631 3403 ntBASIC6.9□□□□□ -1.31
SOX4Q06945 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SOX4Q06945 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.9□□□□□ -1.31
SOX4Q06945 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SOX4Q06945 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SOX4Q06945 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.9□□□□□ -1.31
SOX4Q06945 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SOX4Q06945 MAPK10-323ENST00000641493 3207 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX4Q06945 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
SOX4Q06945 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX4Q06945 RNU4-76P-201ENST00000364509 141 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX4Q06945 XGY1-201ENST00000381172 446 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 MIR640-201ENST00000385086 96 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SOX4Q06945 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SOX4Q06945 OR6C69P-201ENST00000394268 893 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 RPL10P10-201ENST00000403509 664 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 GCNT1P4-201ENST00000404096 329 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 AL023284.3-201ENST00000407767 334 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 RPS15AP38-201ENST00000413110 372 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 USP9YP6-201ENST00000413550 854 ntBASIC6.89□□□□□ -1.31
SOX4Q06945 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms