Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK3Q00526 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK3Q00526 EEF1B2P5-201ENST00000444820 548 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 VN1R48P-201ENST00000448149 1036 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 RN7SL515P-201ENST00000463999 297 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 RPL7P40-201ENST00000481703 745 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 RPS4XP20-201ENST00000505751 772 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK3Q00526 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK3Q00526 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK3Q00526 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDK3Q00526 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK3Q00526 AC051619.2-201ENST00000559063 397 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.27□□□□□ -1.57
CDK3Q00526 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK3Q00526 AC025857.2-201ENST00000602711 238 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 AC009027.1-201ENST00000604510 479 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 AC005252.1-201ENST00000604518 1063 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 AC005972.3-201ENST00000606304 481 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDK3Q00526 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDK3Q00526 AC019080.5-201ENST00000624891 757 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK3Q00526 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CDK3Q00526 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
CDK3Q00526 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK3Q00526 AC003973.3-201ENST00000624863 2822 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CDK3Q00526 AL031595.2-201ENST00000624215 19071 ntBASIC5.27□□□□□ -1.57
CDK3Q00526 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CDK3Q00526 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK3Q00526 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK3Q00526 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 ZNF733P-202ENST00000444809 1573 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK3Q00526 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 RNU1-19P-201ENST00000363306 165 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDK3Q00526 DUTP5-201ENST00000406790 469 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 SPTLC1P2-201ENST00000407089 121 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
CDK3Q00526 AL133482.1-201ENST00000415988 498 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 AC234781.4-201ENST00000419384 244 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 PTP4A1P1-201ENST00000420539 515 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 AC099670.2-201ENST00000435130 321 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 AL359265.1-201ENST00000440296 795 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK3Q00526 AL389915.2-201ENST00000454576 441 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDK3Q00526 CYCSP53-201ENST00000455540 265 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 AC004815.1-201ENST00000484185 331 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK3Q00526 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.26□□□□□ -1.57
CDK3Q00526 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK3Q00526 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK3Q00526 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK3Q00526 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK3Q00526 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK3Q00526 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK3Q00526 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.26□□□□□ -1.57
CDK3Q00526 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK3Q00526 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK3Q00526 BMS1P7-201ENST00000602440 1052 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 AC007423.1-201ENST00000605009 627 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 AL121612.2-201ENST00000612261 482 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 AP003400.3-201ENST00000624904 346 ntBASIC5.26□□□□□ -1.57
CDK3Q00526 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK3Q00526 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.26□□□□□ -1.57
CDK3Q00526 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDK3Q00526 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK3Q00526 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK3Q00526 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK3Q00526 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK3Q00526 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDK3Q00526 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDK3Q00526 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.25□□□□□ -1.57
CDK3Q00526 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDK3Q00526 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CDK3Q00526 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK3Q00526 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK3Q00526 RPL23P2-201ENST00000320371 421 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms