Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.57□□□□□ -1.52
NKX6-1P78426 SNORA58-201ENST00000505219 137 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.57□□□□□ -1.52
NKX6-1P78426 MTATP6P1-201ENST00000514057 681 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 NANOGNBP2-201ENST00000544753 553 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 NIFKP8-201ENST00000560500 874 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.57□□□□□ -1.52
NKX6-1P78426 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NKX6-1P78426 AC068790.7-201ENST00000602347 528 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 MRPS35P3-201ENST00000603189 709 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 AC091193.1-201ENST00000604640 448 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 RPSAP75-201ENST00000605848 301 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AC055764.2-201ENST00000610089 670 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AC026422.1-201ENST00000623961 452 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 MIR1322-201ENST00000638013 71 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX6-1P78426 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX6-1P78426 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
NKX6-1P78426 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX6-1P78426 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX6-1P78426 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX6-1P78426 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NKX6-1P78426 MTCO1P11-201ENST00000429111 1528 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.57□□□□□ -1.52
NKX6-1P78426 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
NKX6-1P78426 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX6-1P78426 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.57□□□□□ -1.52
NKX6-1P78426 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
NKX6-1P78426 AC093225.1-201ENST00000506867 1408 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 CASC19-206ENST00000641028 1430 ntBASIC5.57□□□□□ -1.52
NKX6-1P78426 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NKX6-1P78426 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 CASC19-246ENST00000641625 1606 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NKX6-1P78426 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 SNORA40.2-201ENST00000390847 128 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 RPS3P2-201ENST00000421346 701 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 HMGB1P45-201ENST00000435986 653 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.56□□□□□ -1.52
NKX6-1P78426 NDUFA5P9-201ENST00000472609 340 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.56□□□□□ -1.52
NKX6-1P78426 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC010486.2-201ENST00000505572 483 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC138938.1-201ENST00000515431 782 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 TMEM97P2-201ENST00000517841 403 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC023632.1-201ENST00000518463 375 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC010306.1-201ENST00000523223 1117 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AP000926.4-201ENST00000527351 454 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NKX6-1P78426 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX6-1P78426 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AL354943.1-201ENST00000572103 781 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC008088.1-201ENST00000580993 280 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.56□□□□□ -1.52
NKX6-1P78426 MIR4443-201ENST00000585052 53 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC010503.3-201ENST00000594355 540 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.56□□□□□ -1.52
NKX6-1P78426 AC008555.7-201ENST00000605008 583 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AL392112.1-201ENST00000605115 829 ntBASIC5.56□□□□□ -1.52
NKX6-1P78426 AC109309.2-201ENST00000612597 332 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms