Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.71□□□□□ -1.81
CKS1BP61024 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CKS1BP61024 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC009951.1-201ENST00000623674 2614 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AC022893.2-201ENST00000564832 3296 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AC008725.1-201ENST00000605123 2263 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS1BP61024 RN7SKP44-201ENST00000363602 316 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CKS1BP61024 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS1BP61024 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 MIR3074-201ENST00000384885 81 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CKS1BP61024 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 AL645733.1-201ENST00000402250 217 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 GCNT1P4-201ENST00000404096 329 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AL139039.2-201ENST00000407436 479 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 RNA5SP198-201ENST00000410376 127 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AL035422.1-201ENST00000414193 397 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 NAP1L4P2-201ENST00000425958 899 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS1BP61024 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS1BP61024 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.71□□□□□ -1.82
CKS1BP61024 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC023194.2-201ENST00000465398 406 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 RPL32P33-201ENST00000487023 394 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 OR2A3P-201ENST00000493774 953 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AL158068.1-201ENST00000506116 616 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CKS1BP61024 IGLVIV-53-201ENST00000520107 367 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS1BP61024 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC007956.1-201ENST00000555623 542 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 SNORD39.2-201ENST00000579995 76 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.71□□□□□ -1.82
CKS1BP61024 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC092266.1-201ENST00000610958 165 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 MIR8069-1-201ENST00000616627 86 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 AC015914.2-201ENST00000618167 288 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 MIR8069-2-201ENST00000621412 86 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
CKS1BP61024 AC073869.10-201ENST00000642016 354 ntBASIC3.71□□□□□ -1.82
CKS1BP61024 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC3.71□□□□□ -1.82
CKS1BP61024 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.71□□□□□ -1.82
CKS1BP61024 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CKS1BP61024 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
CKS1BP61024 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
CKS1BP61024 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC3.7□□□□□ -1.82
CKS1BP61024 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 BX005019.1-201ENST00000561881 1810 ntBASIC3.7□□□□□ -1.82
CKS1BP61024 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.7□□□□□ -1.82
CKS1BP61024 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CKS1BP61024 RNU1-19P-201ENST00000363306 165 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms