Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC025253.1-201ENST00000613623 543 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 AL359513.1-201ENST00000614364 557 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 AL031651.1-201ENST00000615357 1438 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
EPHB3P54753 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.46□□□□□ -1.38
EPHB3P54753 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
EPHB3P54753 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 MAPK10-323ENST00000641493 3207 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 AC092821.3-202ENST00000641304 2767 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 AL133243.4-201ENST00000623116 3109 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
EPHB3P54753 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
EPHB3P54753 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.45□□□□□ -1.38
EPHB3P54753 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
EPHB3P54753 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
EPHB3P54753 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 Y_RNA.516-201ENST00000384541 124 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 Y_RNA.517-201ENST00000384551 106 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 RPL7P27-201ENST00000403775 720 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 RNU2-16P-201ENST00000410712 136 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 RN7SKP273-201ENST00000411392 314 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 CYP4F30P-202ENST00000420048 405 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 GLUD1P9-201ENST00000420997 1173 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.45□□□□□ -1.38
EPHB3P54753 ARAFP1-201ENST00000422172 605 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 AC097721.1-201ENST00000427150 1253 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 AC104843.2-201ENST00000427666 297 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 BX119904.1-201ENST00000432026 348 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 AL606490.7-201ENST00000433136 191 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.45□□□□□ -1.38
EPHB3P54753 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.45□□□□□ -1.38
EPHB3P54753 AC073109.1-201ENST00000445066 978 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.45□□□□□ -1.38
EPHB3P54753 AC068135.1-201ENST00000446164 246 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 UBE2V1P7-201ENST00000446395 340 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 ZNF619P1-201ENST00000446539 752 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 AL671855.1-201ENST00000446875 1203 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.45□□□□□ -1.38
EPHB3P54753 PPIAP20-201ENST00000449839 135 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 OR2AF1P-201ENST00000454899 889 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.45□□□□□ -1.38
EPHB3P54753 SCARNA18.1-201ENST00000516330 83 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.45□□□□□ -1.38
EPHB3P54753 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.45□□□□□ -1.38
EPHB3P54753 AC092851.1-201ENST00000535964 478 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.45□□□□□ -1.38
EPHB3P54753 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.45□□□□□ -1.38
EPHB3P54753 AL512347.1-201ENST00000566420 503 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 AC106734.1-201ENST00000568646 663 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.45□□□□□ -1.38
EPHB3P54753 AC074051.3-201ENST00000570238 358 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 MIR6862-1-201ENST00000613016 70 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 MIR6862-2-201ENST00000614755 70 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 PSG10P-201ENST00000501199 1500 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 BIN2P1-201ENST00000504996 1530 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.45□□□□□ -1.38
EPHB3P54753 AC027279.4-201ENST00000624371 2072 ntBASIC6.45□□□□□ -1.38
EPHB3P54753 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
EPHB3P54753 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms