Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 RPL7P29-201ENST00000437151 728 ntBASIC6.87□□□□□ -1.31
LIG3P49916 LDHAP2-201ENST00000437325 985 ntBASIC6.87□□□□□ -1.31
LIG3P49916 RPS26P30-201ENST00000443431 335 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AL137845.2-201ENST00000444292 988 ntBASIC6.87□□□□□ -1.31
LIG3P49916 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.87□□□□□ -1.31
LIG3P49916 CDY23P-201ENST00000451661 1014 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.87□□□□□ -1.31
LIG3P49916 AC083806.1-201ENST00000468934 316 ntBASIC6.87□□□□□ -1.31
LIG3P49916 RPS4XP17-201ENST00000479057 754 ntBASIC6.87□□□□□ -1.31
LIG3P49916 RN7SL654P-201ENST00000479178 292 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AC011825.1-201ENST00000484967 388 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AC109486.1-201ENST00000486833 374 ntBASIC6.87□□□□□ -1.31
LIG3P49916 RN7SL143P-201ENST00000496780 297 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.87□□□□□ -1.31
LIG3P49916 AC111193.1-201ENST00000504097 155 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AC004069.2-201ENST00000505438 1114 ntBASIC6.87□□□□□ -1.31
LIG3P49916 HSPE1P23-201ENST00000509838 286 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.87□□□□□ -1.31
LIG3P49916 HMGB3P13-201ENST00000511263 607 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.87□□□□□ -1.31
LIG3P49916 MTND4LP26-201ENST00000518144 282 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.87□□□□□ -1.31
LIG3P49916 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
LIG3P49916 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.87□□□□□ -1.31
LIG3P49916 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
LIG3P49916 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.87□□□□□ -1.31
LIG3P49916 ROCK1P1-201ENST00000573767 549 ntBASIC6.87□□□□□ -1.31
LIG3P49916 OR4K7P-201ENST00000580232 945 ntBASIC6.87□□□□□ -1.31
LIG3P49916 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC6.87□□□□□ -1.31
LIG3P49916 RPS4XP21-201ENST00000603814 750 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AL031775.1-201ENST00000607014 887 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.87□□□□□ -1.31
LIG3P49916 MIR6849-201ENST00000618543 69 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AC069209.1-201ENST00000619282 651 ntBASIC6.87□□□□□ -1.31
LIG3P49916 AL138693.1-201ENST00000622219 129 ntBASIC6.87□□□□□ -1.31
LIG3P49916 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.87□□□□□ -1.31
LIG3P49916 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
LIG3P49916 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.87□□□□□ -1.31
LIG3P49916 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
LIG3P49916 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
LIG3P49916 MTND5P23-201ENST00000430812 1655 ntBASIC6.87□□□□□ -1.31
LIG3P49916 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIG3P49916 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIG3P49916 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIG3P49916 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.87□□□□□ -1.31
LIG3P49916 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG3P49916 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG3P49916 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG3P49916 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG3P49916 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.86□□□□□ -1.31
LIG3P49916 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.86□□□□□ -1.31
LIG3P49916 AC092070.2-203ENST00000598377 3644 ntBASIC6.86□□□□□ -1.31
LIG3P49916 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG3P49916 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG3P49916 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
LIG3P49916 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.86□□□□□ -1.31
LIG3P49916 MTND4P31-201ENST00000425607 1343 ntBASIC6.86□□□□□ -1.31
LIG3P49916 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIG3P49916 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
LIG3P49916 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
LIG3P49916 RNU6-1119P-201ENST00000384349 108 ntBASIC6.86□□□□□ -1.31
LIG3P49916 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG3P49916 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIG3P49916 ARSFP1-201ENST00000398758 477 ntBASIC6.86□□□□□ -1.31
LIG3P49916 NPM1P38-201ENST00000403835 865 ntBASIC6.86□□□□□ -1.31
LIG3P49916 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
LIG3P49916 PTPN2P1-201ENST00000423212 1072 ntBASIC6.86□□□□□ -1.31
LIG3P49916 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.86□□□□□ -1.31
LIG3P49916 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 AC009263.1-201ENST00000441193 1239 ntBASIC6.86□□□□□ -1.31
LIG3P49916 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
LIG3P49916 DNAJC19P8-201ENST00000452887 259 ntBASIC6.86□□□□□ -1.31
LIG3P49916 RPL31P11-202ENST00000454082 372 ntBASIC6.86□□□□□ -1.31
LIG3P49916 RFC5P1-201ENST00000454419 874 ntBASIC6.86□□□□□ -1.31
LIG3P49916 AC002075.1-201ENST00000457396 676 ntBASIC6.86□□□□□ -1.31
LIG3P49916 AC110749.1-201ENST00000462007 357 ntBASIC6.86□□□□□ -1.31
LIG3P49916 MTND1P16-201ENST00000465177 898 ntBASIC6.86□□□□□ -1.31
LIG3P49916 RN7SL216P-201ENST00000471607 298 ntBASIC6.86□□□□□ -1.31
LIG3P49916 AC073522.1-201ENST00000483312 377 ntBASIC6.86□□□□□ -1.31
LIG3P49916 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
LIG3P49916 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
LIG3P49916 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 AC093878.1-201ENST00000515630 432 ntBASIC6.86□□□□□ -1.31
LIG3P49916 RNU6-1178P-201ENST00000516674 107 ntBASIC6.86□□□□□ -1.31
LIG3P49916 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.86□□□□□ -1.31
LIG3P49916 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.86□□□□□ -1.31
LIG3P49916 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.86□□□□□ -1.31
LIG3P49916 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.86□□□□□ -1.31
LIG3P49916 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.86□□□□□ -1.31
LIG3P49916 EIF1P6-201ENST00000600054 334 ntBASIC6.86□□□□□ -1.31
LIG3P49916 AC093765.1-201ENST00000603758 881 ntBASIC6.86□□□□□ -1.31
LIG3P49916 AL035410.2-201ENST00000604963 864 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms