Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC011374.2-201ENST00000607135 526 ntBASIC5.11□□□□□ -1.59
SOX2P48431 OR2BH1P-201ENST00000608850 864 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AL021918.2-201ENST00000613415 194 ntBASIC5.11□□□□□ -1.59
SOX2P48431 U6.48-201ENST00000618523 106 ntBASIC5.11□□□□□ -1.59
SOX2P48431 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 AC013470.4-201ENST00000619978 986 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AC112694.2-201ENST00000623697 768 ntBASIC5.11□□□□□ -1.59
SOX2P48431 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SOX2P48431 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.11□□□□□ -1.59
SOX2P48431 AL596275.2-207ENST00000641188 675 ntBASIC5.11□□□□□ -1.59
SOX2P48431 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.11□□□□□ -1.59
SOX2P48431 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SOX2P48431 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 NLRP3P1-201ENST00000622303 1785 ntBASIC5.11□□□□□ -1.59
SOX2P48431 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX2P48431 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX2P48431 MFSD8-219ENST00000641228 2559 ntBASIC5.1□□□□□ -1.59
SOX2P48431 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SOX2P48431 Z95114.1-201ENST00000624264 14574 ntBASIC5.1□□□□□ -1.59
SOX2P48431 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 RNA5SP110-201ENST00000362638 115 ntBASIC5.1□□□□□ -1.59
SOX2P48431 RNA5SP27-201ENST00000363839 119 ntBASIC5.1□□□□□ -1.59
SOX2P48431 RN7SKP257-201ENST00000364525 309 ntBASIC5.1□□□□□ -1.59
SOX2P48431 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX2P48431 RNU6-224P-201ENST00000384055 107 ntBASIC5.1□□□□□ -1.59
SOX2P48431 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 ATP5F1P2-201ENST00000398143 760 ntBASIC5.1□□□□□ -1.59
SOX2P48431 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 HMGB3P31-201ENST00000413333 595 ntBASIC5.1□□□□□ -1.59
SOX2P48431 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 AL513175.2-201ENST00000422071 443 ntBASIC5.1□□□□□ -1.59
SOX2P48431 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 OR6K5P-201ENST00000447050 945 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AL589880.1-201ENST00000448271 287 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.1□□□□□ -1.59
SOX2P48431 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 OR7E157P-201ENST00000494376 911 ntBASIC5.1□□□□□ -1.59
SOX2P48431 RPL5P23-201ENST00000496040 868 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AC082651.2-201ENST00000496833 166 ntBASIC5.1□□□□□ -1.59
SOX2P48431 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX2P48431 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.1□□□□□ -1.59
SOX2P48431 OR7E99P-201ENST00000505750 922 ntBASIC5.1□□□□□ -1.59
SOX2P48431 GLUD1P3-202ENST00000508551 200 ntBASIC5.1□□□□□ -1.59
SOX2P48431 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 ZNF519P4-201ENST00000514008 125 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 HMGB1P1-201ENST00000522557 636 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AC109635.6-201ENST00000525487 1113 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.1□□□□□ -1.59
SOX2P48431 AL109741.3-201ENST00000561748 592 ntBASIC5.1□□□□□ -1.59
SOX2P48431 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX2P48431 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 AC013444.2-201ENST00000603317 787 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AL035411.2-201ENST00000604022 421 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AC107952.2-201ENST00000606048 486 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AC015712.7-201ENST00000615211 635 ntBASIC5.1□□□□□ -1.59
SOX2P48431 RNA5SP439-201ENST00000617595 124 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AC010975.3-201ENST00000618727 978 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AL512652.1-201ENST00000619006 500 ntBASIC5.1□□□□□ -1.59
SOX2P48431 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 AC211486.4-201ENST00000621495 113 ntBASIC5.1□□□□□ -1.59
SOX2P48431 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 BX649567.1-201ENST00000642071 1134 ntBASIC5.1□□□□□ -1.59
SOX2P48431 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX2P48431 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SOX2P48431 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SOX2P48431 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms