Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.07□□□□□ -1.6
RORAP35398 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.07□□□□□ -1.6
RORAP35398 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.07□□□□□ -1.6
RORAP35398 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RORAP35398 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RORAP35398 RNU6-729P-201ENST00000384399 107 ntBASIC5.07□□□□□ -1.6
RORAP35398 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.07□□□□□ -1.6
RORAP35398 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.07□□□□□ -1.6
RORAP35398 AC006455.6-201ENST00000426192 893 ntBASIC5.07□□□□□ -1.6
RORAP35398 CLUHP1-201ENST00000435012 1190 ntBASIC5.07□□□□□ -1.6
RORAP35398 AL359265.1-201ENST00000440296 795 ntBASIC5.07□□□□□ -1.6
RORAP35398 MED28P3-201ENST00000444288 531 ntBASIC5.07□□□□□ -1.6
RORAP35398 RBMY2TP-201ENST00000451162 947 ntBASIC5.07□□□□□ -1.6
RORAP35398 AC092754.1-201ENST00000472975 479 ntBASIC5.07□□□□□ -1.6
RORAP35398 RPS18P6-201ENST00000476880 458 ntBASIC5.07□□□□□ -1.6
RORAP35398 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.07□□□□□ -1.6
RORAP35398 AC147055.3-201ENST00000510547 851 ntBASIC5.07□□□□□ -1.6
RORAP35398 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.07□□□□□ -1.6
RORAP35398 AL671862.1-201ENST00000515851 349 ntBASIC5.07□□□□□ -1.6
RORAP35398 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.07□□□□□ -1.6
RORAP35398 YWHABP2-201ENST00000540201 713 ntBASIC5.07□□□□□ -1.6
RORAP35398 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.07□□□□□ -1.6
RORAP35398 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.07□□□□□ -1.6
RORAP35398 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.07□□□□□ -1.6
RORAP35398 LSM3P2-201ENST00000551246 273 ntBASIC5.07□□□□□ -1.6
RORAP35398 OR11H3P-201ENST00000554547 982 ntBASIC5.07□□□□□ -1.6
RORAP35398 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.07□□□□□ -1.6
RORAP35398 SETP1-201ENST00000556014 845 ntBASIC5.07□□□□□ -1.6
RORAP35398 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.07□□□□□ -1.6
RORAP35398 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.07□□□□□ -1.6
RORAP35398 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.07□□□□□ -1.6
RORAP35398 RN7SL708P-201ENST00000580952 299 ntBASIC5.07□□□□□ -1.6
RORAP35398 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.07□□□□□ -1.6
RORAP35398 AC095055.1-201ENST00000603472 1113 ntBASIC5.07□□□□□ -1.6
RORAP35398 AC020763.5-201ENST00000623298 430 ntBASIC5.07□□□□□ -1.6
RORAP35398 AP003072.5-201ENST00000623872 773 ntBASIC5.07□□□□□ -1.6
RORAP35398 AC135068.5-201ENST00000624197 983 ntBASIC5.07□□□□□ -1.6
RORAP35398 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.07□□□□□ -1.6
RORAP35398 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RORAP35398 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RORAP35398 AC097461.1-201ENST00000568928 2821 ntBASIC5.06□□□□□ -1.6
RORAP35398 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RORAP35398 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.06□□□□□ -1.6
RORAP35398 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RORAP35398 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RORAP35398 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RORAP35398 SNORA17.1-201ENST00000362945 126 ntBASIC5.06□□□□□ -1.6
RORAP35398 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RORAP35398 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RORAP35398 RNU6-1320P-201ENST00000390838 107 ntBASIC5.06□□□□□ -1.6
RORAP35398 RNU6-1269P-201ENST00000391139 107 ntBASIC5.06□□□□□ -1.6
RORAP35398 U3.36-201ENST00000408418 213 ntBASIC5.06□□□□□ -1.6
RORAP35398 AL133482.1-201ENST00000415988 498 ntBASIC5.06□□□□□ -1.6
RORAP35398 AC106901.1-201ENST00000425086 698 ntBASIC5.06□□□□□ -1.6
RORAP35398 AL591623.2-201ENST00000449978 222 ntBASIC5.06□□□□□ -1.6
RORAP35398 OTX2P1-201ENST00000450956 354 ntBASIC5.06□□□□□ -1.6
RORAP35398 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.06□□□□□ -1.6
RORAP35398 RNU6-599P-201ENST00000459383 107 ntBASIC5.06□□□□□ -1.6
RORAP35398 RNU6-1193P-201ENST00000459461 107 ntBASIC5.06□□□□□ -1.6
RORAP35398 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.06□□□□□ -1.6
RORAP35398 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RORAP35398 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RORAP35398 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.06□□□□□ -1.6
RORAP35398 RPS4XP20-201ENST00000505751 772 ntBASIC5.06□□□□□ -1.6
RORAP35398 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.06□□□□□ -1.6
RORAP35398 RPS27AP18-201ENST00000515536 459 ntBASIC5.06□□□□□ -1.6
RORAP35398 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.06□□□□□ -1.6
RORAP35398 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.06□□□□□ -1.6
RORAP35398 DUX4L52-201ENST00000549363 777 ntBASIC5.06□□□□□ -1.6
RORAP35398 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.06□□□□□ -1.6
RORAP35398 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.06□□□□□ -1.6
RORAP35398 AC006116.3-201ENST00000592968 361 ntBASIC5.06□□□□□ -1.6
RORAP35398 AC087763.1-201ENST00000603391 286 ntBASIC5.06□□□□□ -1.6
RORAP35398 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.06□□□□□ -1.6
RORAP35398 RNU6-368P-201ENST00000620928 107 ntBASIC5.06□□□□□ -1.6
RORAP35398 RNU6-538P-201ENST00000622329 107 ntBASIC5.06□□□□□ -1.6
RORAP35398 LINC01739-205ENST00000641890 573 ntBASIC5.06□□□□□ -1.6
RORAP35398 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RORAP35398 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RORAP35398 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RORAP35398 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RORAP35398 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RORAP35398 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RORAP35398 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RORAP35398 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RORAP35398 AC093775.1-201ENST00000624154 1868 ntBASIC5.05□□□□□ -1.6
RORAP35398 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.05□□□□□ -1.6
RORAP35398 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
RORAP35398 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RORAP35398 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.05□□□□□ -1.6
RORAP35398 SMG1P4-204ENST00000523028 4131 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms