Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.02□□□□□ -1.45
CIITAP33076 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.02□□□□□ -1.45
CIITAP33076 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.02□□□□□ -1.45
CIITAP33076 AL590410.1-201ENST00000617925 333 ntBASIC6.02□□□□□ -1.45
CIITAP33076 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.02□□□□□ -1.45
CIITAP33076 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CIITAP33076 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 AC079298.1-201ENST00000625026 1619 ntBASIC6.02□□□□□ -1.45
CIITAP33076 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CIITAP33076 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.02□□□□□ -1.45
CIITAP33076 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CIITAP33076 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CIITAP33076 CASC19-260ENST00000641828 2001 ntBASIC6.01□□□□□ -1.45
CIITAP33076 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CIITAP33076 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CIITAP33076 MIR7-1-201ENST00000384871 110 ntBASIC6.01□□□□□ -1.45
CIITAP33076 MIR223-201ENST00000385204 110 ntBASIC6.01□□□□□ -1.45
CIITAP33076 NUDT19P3-201ENST00000404698 555 ntBASIC6.01□□□□□ -1.45
CIITAP33076 AL139039.2-201ENST00000407436 479 ntBASIC6.01□□□□□ -1.45
CIITAP33076 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.01□□□□□ -1.45
CIITAP33076 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 MED28P3-201ENST00000444288 531 ntBASIC6.01□□□□□ -1.45
CIITAP33076 RPL31P53-201ENST00000457065 348 ntBASIC6.01□□□□□ -1.45
CIITAP33076 RN7SL222P-201ENST00000476452 299 ntBASIC6.01□□□□□ -1.45
CIITAP33076 AC104629.1-201ENST00000494226 508 ntBASIC6.01□□□□□ -1.45
CIITAP33076 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.01□□□□□ -1.45
CIITAP33076 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.01□□□□□ -1.45
CIITAP33076 MTND3P24-201ENST00000506306 329 ntBASIC6.01□□□□□ -1.45
CIITAP33076 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.01□□□□□ -1.45
CIITAP33076 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CIITAP33076 AC022360.1-201ENST00000521058 340 ntBASIC6.01□□□□□ -1.45
CIITAP33076 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.01□□□□□ -1.45
CIITAP33076 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.01□□□□□ -1.45
CIITAP33076 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.01□□□□□ -1.45
CIITAP33076 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.01□□□□□ -1.45
CIITAP33076 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 OR7M1P-201ENST00000608946 533 ntBASIC6.01□□□□□ -1.45
CIITAP33076 AL162574.1-201ENST00000615702 950 ntBASIC6.01□□□□□ -1.45
CIITAP33076 AC022306.3-201ENST00000619930 550 ntBASIC6.01□□□□□ -1.45
CIITAP33076 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.01□□□□□ -1.45
CIITAP33076 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CIITAP33076 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CIITAP33076 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CIITAP33076 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.01□□□□□ -1.45
CIITAP33076 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.01□□□□□ -1.45
CIITAP33076 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6□□□□□ -1.45
CIITAP33076 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
CIITAP33076 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 AC011493.1-201ENST00000596753 1632 ntBASIC6□□□□□ -1.45
CIITAP33076 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CIITAP33076 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CIITAP33076 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CIITAP33076 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6□□□□□ -1.45
CIITAP33076 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6□□□□□ -1.45
CIITAP33076 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 U3.3-201ENST00000362986 216 ntBASIC6□□□□□ -1.45
CIITAP33076 HSPA8P15-201ENST00000401676 786 ntBASIC6□□□□□ -1.45
CIITAP33076 SEPT7P8-201ENST00000413308 775 ntBASIC6□□□□□ -1.45
CIITAP33076 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6□□□□□ -1.45
CIITAP33076 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6□□□□□ -1.45
CIITAP33076 AL139148.1-201ENST00000427122 680 ntBASIC6□□□□□ -1.45
CIITAP33076 AC005033.1-201ENST00000428904 813 ntBASIC6□□□□□ -1.45
CIITAP33076 MTND4LP7-201ENST00000431728 294 ntBASIC6□□□□□ -1.45
CIITAP33076 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6□□□□□ -1.45
CIITAP33076 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6□□□□□ -1.45
CIITAP33076 AC090804.1-201ENST00000448870 490 ntBASIC6□□□□□ -1.45
CIITAP33076 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6□□□□□ -1.45
CIITAP33076 MTND5P8-201ENST00000449817 1083 ntBASIC6□□□□□ -1.45
CIITAP33076 AC093763.2-201ENST00000505334 1223 ntBASIC6□□□□□ -1.45
CIITAP33076 HIGD1AP14-201ENST00000507617 282 ntBASIC6□□□□□ -1.45
CIITAP33076 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6□□□□□ -1.45
CIITAP33076 AC117525.1-201ENST00000515228 503 ntBASIC6□□□□□ -1.45
CIITAP33076 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 AC004825.1-201ENST00000555068 586 ntBASIC6□□□□□ -1.45
CIITAP33076 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6□□□□□ -1.45
CIITAP33076 AC095055.1-201ENST00000603472 1113 ntBASIC6□□□□□ -1.45
CIITAP33076 BNIP3P19-201ENST00000605397 577 ntBASIC6□□□□□ -1.45
CIITAP33076 AC126915.2-201ENST00000610957 190 ntBASIC6□□□□□ -1.45
CIITAP33076 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CIITAP33076 AC026367.3-201ENST00000619032 590 ntBASIC6□□□□□ -1.45
CIITAP33076 AC097372.4-201ENST00000625025 466 ntBASIC6□□□□□ -1.45
CIITAP33076 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms