Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A5P29400 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
COL4A5P29400 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC5.89□□□□□ -1.47
COL4A5P29400 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A5P29400 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A5P29400 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A5P29400 RNA5SP509-201ENST00000364577 119 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.89□□□□□ -1.47
COL4A5P29400 RPL19P16-201ENST00000433839 588 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 FHP1-201ENST00000442741 703 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 CDC27P1-201ENST00000445384 715 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 BX842559.2-201ENST00000451418 605 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.89□□□□□ -1.47
COL4A5P29400 AC022133.1-201ENST00000490961 571 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 SLC25A15P5-201ENST00000508033 253 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 AP001781.1-201ENST00000530977 207 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.89□□□□□ -1.47
COL4A5P29400 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.89□□□□□ -1.47
COL4A5P29400 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.89□□□□□ -1.47
COL4A5P29400 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.89□□□□□ -1.47
COL4A5P29400 RBPJP2-201ENST00000618187 1444 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A5P29400 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A5P29400 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A5P29400 MAPK10-263ENST00000641052 4307 ntBASIC5.89□□□□□ -1.47
COL4A5P29400 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.89□□□□□ -1.47
COL4A5P29400 RN7SKP145-201ENST00000363291 303 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.88□□□□□ -1.47
COL4A5P29400 AC097523.2-201ENST00000435551 652 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 Z95152.1-201ENST00000453556 656 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.88□□□□□ -1.47
COL4A5P29400 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A5P29400 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.88□□□□□ -1.47
COL4A5P29400 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.88□□□□□ -1.47
COL4A5P29400 MIR5699-201ENST00000578903 90 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 AC005191.1-201ENST00000603950 358 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 AC092653.1-201ENST00000608509 531 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.88□□□□□ -1.47
COL4A5P29400 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
COL4A5P29400 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC5.88□□□□□ -1.47
COL4A5P29400 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COL4A5P29400 AL451142.1-201ENST00000375867 775 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 RAD23BP1-201ENST00000421404 1227 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 RPL12P28-201ENST00000430852 489 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 MTND2P28-201ENST00000457540 1044 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 AC091868.1-201ENST00000508746 304 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A5P29400 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A5P29400 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.88□□□□□ -1.47
COL4A5P29400 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.88□□□□□ -1.47
COL4A5P29400 MIR3138-201ENST00000585238 82 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COL4A5P29400 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A5P29400 AP001267.4-201ENST00000602598 545 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 AC100847.1-201ENST00000611316 481 ntBASIC5.88□□□□□ -1.47
COL4A5P29400 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A5P29400 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL4A5P29400 AC108751.5-201ENST00000492880 1336 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A5P29400 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A5P29400 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A5P29400 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COL4A5P29400 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL4A5P29400 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A5P29400 ASNSP1-204ENST00000641977 1664 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
COL4A5P29400 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL4A5P29400 AL035079.1-201ENST00000405210 287 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 RN7SKP263-201ENST00000411194 309 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A5P29400 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.87□□□□□ -1.47
COL4A5P29400 RPL7AP49-201ENST00000429522 581 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 AL591438.1-201ENST00000433508 581 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 AC099670.2-201ENST00000435130 321 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A5P29400 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A5P29400 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A5P29400 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A5P29400 AC004232.3-201ENST00000622977 525 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A5P29400 AL449283.1-201ENST00000602631 3403 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A5P29400 CASC19-243ENST00000641588 1546 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 AC104118.1-201ENST00000607625 1589 ntBASIC5.87□□□□□ -1.47
COL4A5P29400 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.87□□□□□ -1.47
COL4A5P29400 SAMM50P1-201ENST00000455403 1399 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms