Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.61□□□□□ -1.19
RFX1P22670 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC7.61□□□□□ -1.19
RFX1P22670 HIGD1AP6-201ENST00000521833 279 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AP003084.1-201ENST00000524828 742 ntBASIC7.61□□□□□ -1.19
RFX1P22670 MED28P5-201ENST00000528254 438 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 SLC2A13P1-201ENST00000531560 322 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.61□□□□□ -1.19
RFX1P22670 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 CR383656.6-201ENST00000550518 394 ntBASIC7.61□□□□□ -1.19
RFX1P22670 EEF1B2P4-201ENST00000551398 348 ntBASIC7.61□□□□□ -1.19
RFX1P22670 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 TPRKBP2-201ENST00000565969 475 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.61□□□□□ -1.19
RFX1P22670 MIR4528-201ENST00000577763 90 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 SYPL1P2-201ENST00000582878 727 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 AL022154.1-201ENST00000604698 785 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AC113361.1-201ENST00000606683 543 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.61□□□□□ -1.19
RFX1P22670 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AC026634.1-201ENST00000634369 198 ntBASIC7.61□□□□□ -1.19
RFX1P22670 AL034417.4-202ENST00000642135 2236 ntBASIC7.61□□□□□ -1.19
RFX1P22670 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.61□□□□□ -1.19
RFX1P22670 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 AC119744.1-201ENST00000454746 1715 ntBASIC7.61□□□□□ -1.19
RFX1P22670 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RFX1P22670 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.6□□□□□ -1.19
RFX1P22670 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
RFX1P22670 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.6□□□□□ -1.19
RFX1P22670 AC009237.3-203ENST00000442128 3551 ntBASIC7.6□□□□□ -1.19
RFX1P22670 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.6□□□□□ -1.19
RFX1P22670 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 AL512646.1-201ENST00000269395 1077 ntBASIC7.6□□□□□ -1.19
RFX1P22670 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.6□□□□□ -1.19
RFX1P22670 RPL24P4-201ENST00000326586 421 ntBASIC7.6□□□□□ -1.19
RFX1P22670 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RFX1P22670 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RFX1P22670 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.6□□□□□ -1.19
RFX1P22670 EI24P3-201ENST00000399046 1062 ntBASIC7.6□□□□□ -1.19
RFX1P22670 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 RN7SKP271-201ENST00000410528 320 ntBASIC7.6□□□□□ -1.19
RFX1P22670 RN7SKP268-201ENST00000411107 316 ntBASIC7.6□□□□□ -1.19
RFX1P22670 RPL17P12-201ENST00000413391 526 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC7.6□□□□□ -1.19
RFX1P22670 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 AC092106.2-201ENST00000436597 487 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AL512593.1-201ENST00000444758 779 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.6□□□□□ -1.19
RFX1P22670 NPM1P9-201ENST00000453156 844 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.6□□□□□ -1.19
RFX1P22670 AL117692.1-201ENST00000494283 713 ntBASIC7.6□□□□□ -1.19
RFX1P22670 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.6□□□□□ -1.19
RFX1P22670 RPL7L1P13-201ENST00000511702 739 ntBASIC7.6□□□□□ -1.19
RFX1P22670 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.6□□□□□ -1.19
RFX1P22670 RN7SKP233-201ENST00000517005 110 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.6□□□□□ -1.19
RFX1P22670 AC008562.1-201ENST00000521763 330 ntBASIC7.6□□□□□ -1.19
RFX1P22670 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.6□□□□□ -1.19
RFX1P22670 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.6□□□□□ -1.19
RFX1P22670 GLYATL1P4-201ENST00000529326 906 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.6□□□□□ -1.19
RFX1P22670 RPS3AP4-201ENST00000555161 764 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AC092325.1-201ENST00000566449 554 ntBASIC7.6□□□□□ -1.19
RFX1P22670 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.6□□□□□ -1.19
RFX1P22670 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.6□□□□□ -1.19
RFX1P22670 AC092960.1-201ENST00000604762 351 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.6□□□□□ -1.19
RFX1P22670 AC005753.1-201ENST00000623837 618 ntBASIC7.6□□□□□ -1.19
RFX1P22670 AC120349.2-201ENST00000625002 298 ntBASIC7.6□□□□□ -1.19
RFX1P22670 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.6□□□□□ -1.19
RFX1P22670 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.6□□□□□ -1.19
RFX1P22670 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.6□□□□□ -1.19
RFX1P22670 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.6□□□□□ -1.19
RFX1P22670 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.6□□□□□ -1.19
RFX1P22670 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RFX1P22670 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms