Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 PA2G4P6-201ENST00000438325 1197 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 RPS11P7-201ENST00000442125 465 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 RPL7P45-201ENST00000455851 743 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC079168.1-201ENST00000458741 345 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC022133.1-201ENST00000490961 571 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 RPSAP51-201ENST00000497462 645 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 BTG4P1-201ENST00000510421 183 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 HMGB1P40-201ENST00000525121 540 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 SUGT1P3-202ENST00000604259 383 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC109309.2-201ENST00000612597 332 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 MIR6886-201ENST00000619864 61 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AL078621.3-201ENST00000623707 2042 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AC007342.7-201ENST00000624610 2337 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 RNA5SP241-201ENST00000391326 114 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 RN7SKP229-201ENST00000410465 302 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AC090018.1-201ENST00000434369 367 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 CYCSP11-201ENST00000436426 315 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AC090804.1-201ENST00000448870 490 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 CBX1P2-201ENST00000453841 458 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 RN7SL423P-201ENST00000486202 304 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 RN7SL547P-201ENST00000490793 290 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 RPS12P31-201ENST00000491419 398 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 EIF3LP3-201ENST00000495197 822 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 ATP5LP3-201ENST00000514223 304 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 RNU6-551P-201ENST00000516661 103 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 OR7E10P-201ENST00000526420 991 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AC096553.1-201ENST00000605169 829 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.4□□□□□ -1.54
HLA-DPA1P20036 AC074101.1-201ENST00000637861 241 ntBASIC5.4□□□□□ -1.54
HLA-DPA1P20036 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.55
HLA-DPA1P20036 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DPA1P20036 RN7SKP160-201ENST00000363804 340 ntBASIC5.39□□□□□ -1.55
HLA-DPA1P20036 RN7SKP153-201ENST00000365026 316 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms