Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TIMM9P3-201ENST00000428659 274 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.03□□□□□ -1.28
NFKB1P19838 ARPC3P1-201ENST00000437218 533 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 OSTCP2-201ENST00000437956 444 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AC093019.1-201ENST00000443135 252 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 RPS4XP4-201ENST00000443195 763 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.03□□□□□ -1.28
NFKB1P19838 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC7.03□□□□□ -1.28
NFKB1P19838 AL929410.2-201ENST00000451170 189 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.03□□□□□ -1.28
NFKB1P19838 RN7SL149P-201ENST00000465197 281 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AC083806.1-201ENST00000468934 316 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 LARP1BP2-201ENST00000486594 519 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 AC019235.1-201ENST00000503847 207 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 DUTP7-201ENST00000507982 486 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 SUMO2P7-201ENST00000511179 285 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 RN7SKP31-201ENST00000516354 278 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 RN7SKP11-201ENST00000517018 287 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.03□□□□□ -1.28
NFKB1P19838 AP006587.5-201ENST00000532033 739 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.03□□□□□ -1.28
NFKB1P19838 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.03□□□□□ -1.28
NFKB1P19838 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 AL133457.1-201ENST00000564251 987 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.03□□□□□ -1.28
NFKB1P19838 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.03□□□□□ -1.28
NFKB1P19838 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.03□□□□□ -1.28
NFKB1P19838 AC011447.2-201ENST00000592921 283 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AC022432.1-201ENST00000595739 310 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AC008277.2-201ENST00000605196 797 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 AC012511.1-201ENST00000608140 449 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 AC120349.2-201ENST00000625002 298 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 SPATA2P1-201ENST00000431223 2055 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 OR2AH1P-202ENST00000641232 2744 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
NFKB1P19838 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
NFKB1P19838 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NFKB1P19838 AL359263.1-201ENST00000441188 2796 ntBASIC7.03□□□□□ -1.28
NFKB1P19838 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
NFKB1P19838 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.02□□□□□ -1.29
NFKB1P19838 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 AC102941.1-201ENST00000567616 1537 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 BX284613.1-201ENST00000452221 1641 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 ASNSP6-201ENST00000592770 1618 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
NFKB1P19838 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.02□□□□□ -1.29
NFKB1P19838 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.02□□□□□ -1.29
NFKB1P19838 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NFKB1P19838 AC092821.3-202ENST00000641304 2767 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NFKB1P19838 RNU5F-6P-201ENST00000362979 116 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 RNU6-534P-201ENST00000364877 106 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 RPL31P1-201ENST00000398116 372 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.02□□□□□ -1.29
NFKB1P19838 MTCYBP36-201ENST00000404146 440 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
NFKB1P19838 SOD1P1-201ENST00000407803 440 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 LINC00993-201ENST00000420453 540 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AC007365.2-201ENST00000428806 458 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 MTCYBP45-201ENST00000435243 565 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AC104850.1-201ENST00000435940 476 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NFKB1P19838 RPS26P30-201ENST00000443431 335 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 SRP68P2-201ENST00000456184 254 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NFKB1P19838 OR52A4P-201ENST00000472867 958 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 RN7SL143P-201ENST00000496780 297 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 SETP14-201ENST00000497538 873 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 DCAF13P2-201ENST00000514188 555 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 PAICSP4-201ENST00000517543 1253 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.02□□□□□ -1.29
NFKB1P19838 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 AP001994.1-201ENST00000527539 826 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AP002748.2-201ENST00000528671 348 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.02□□□□□ -1.29
NFKB1P19838 MIR4800-201ENST00000537353 80 ntBASIC7.02□□□□□ -1.29
NFKB1P19838 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC7.02□□□□□ -1.29
NFKB1P19838 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.02□□□□□ -1.29
NFKB1P19838 AL591767.3-201ENST00000554632 525 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms