Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTPN1P18031 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.36□□□□□ -1.39
PTPN1P18031 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTPN1P18031 Y_RNA.505-201ENST00000384489 102 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 SNORD116-4-201ENST00000384733 96 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AL360271.1-201ENST00000395679 510 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.36□□□□□ -1.39
PTPN1P18031 AL138880.1-201ENST00000405824 642 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AL451046.1-201ENST00000406097 534 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 CDY17P-201ENST00000414121 1282 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.36□□□□□ -1.39
PTPN1P18031 AC016027.5-201ENST00000427227 210 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 HIGD1AP12-201ENST00000427832 281 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 CDY8P-201ENST00000428380 1279 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 ETF1P3-201ENST00000430422 1160 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 NDUFS5P5-201ENST00000437256 321 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 MTND1P34-201ENST00000438556 671 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.36□□□□□ -1.39
PTPN1P18031 AC118469.1-201ENST00000442943 488 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 BMS1P10-201ENST00000443754 1120 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 RPL34P26-201ENST00000445636 354 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 CASP3P1-201ENST00000446037 609 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.36□□□□□ -1.39
PTPN1P18031 CDY20P-201ENST00000447528 1279 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 OR51B8P-201ENST00000449892 769 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 HMGB1P5-202ENST00000451497 985 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.36□□□□□ -1.39
PTPN1P18031 AC144530.1-201ENST00000452862 555 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 SDC4P-201ENST00000453285 601 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 GEMIN2P1-201ENST00000454246 752 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 HLA-DPA3-207ENST00000454398 229 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 RPL31P3-201ENST00000458430 332 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.36□□□□□ -1.39
PTPN1P18031 RPS3AP43-201ENST00000479743 781 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 RPL23AP44-201ENST00000482216 473 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.36□□□□□ -1.39
PTPN1P18031 AC093890.1-201ENST00000502554 540 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.36□□□□□ -1.39
PTPN1P18031 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.36□□□□□ -1.39
PTPN1P18031 SETP21-201ENST00000514799 892 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 SNORA31.13-201ENST00000516624 135 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 HMGB1P1-201ENST00000522557 636 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.36□□□□□ -1.39
PTPN1P18031 AC068305.2-201ENST00000550567 1205 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.36□□□□□ -1.39
PTPN1P18031 AC008015.1-201ENST00000555505 465 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AC090888.1-201ENST00000561335 1141 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.36□□□□□ -1.39
PTPN1P18031 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.36□□□□□ -1.39
PTPN1P18031 AC004890.3-201ENST00000605566 1095 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 uc_338.26-201ENST00000612659 160 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AL021918.2-201ENST00000613415 194 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AL138960.1-201ENST00000613838 513 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AL121890.3-201ENST00000618494 516 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AP003497.2-201ENST00000624220 967 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AC092159.4-201ENST00000624944 550 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 AC129915.3-201ENST00000634128 948 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 CASC19-222ENST00000641321 1173 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.36□□□□□ -1.39
PTPN1P18031 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTPN1P18031 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTPN1P18031 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PTPN1P18031 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTPN1P18031 BX005019.1-201ENST00000561881 1810 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTPN1P18031 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTPN1P18031 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTPN1P18031 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PTPN1P18031 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTPN1P18031 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.36□□□□□ -1.39
PTPN1P18031 ELL2P3-201ENST00000457883 1602 ntBASIC6.36□□□□□ -1.39
PTPN1P18031 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTPN1P18031 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PTPN1P18031 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.35□□□□□ -1.39
PTPN1P18031 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
PTPN1P18031 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PTPN1P18031 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PTPN1P18031 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PTPN1P18031 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTPN1P18031 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PTPN1P18031 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTPN1P18031 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.35□□□□□ -1.39
PTPN1P18031 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTPN1P18031 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.35□□□□□ -1.39
PTPN1P18031 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.35□□□□□ -1.39
PTPN1P18031 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PTPN1P18031 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PTPN1P18031 SELENOWP1-201ENST00000322792 252 ntBASIC6.35□□□□□ -1.39
PTPN1P18031 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTPN1P18031 Y_RNA.201-201ENST00000364052 96 ntBASIC6.35□□□□□ -1.39
PTPN1P18031 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.35□□□□□ -1.39
PTPN1P18031 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTPN1P18031 RNU5A-2P-201ENST00000384337 116 ntBASIC6.35□□□□□ -1.39
PTPN1P18031 HMGN1P20-201ENST00000411849 300 ntBASIC6.35□□□□□ -1.39
PTPN1P18031 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.35□□□□□ -1.39
PTPN1P18031 AC023128.2-201ENST00000420880 1223 ntBASIC6.35□□□□□ -1.39
PTPN1P18031 BX284632.2-201ENST00000421091 399 ntBASIC6.35□□□□□ -1.39
PTPN1P18031 RPF2P1-201ENST00000424137 906 ntBASIC6.35□□□□□ -1.39
PTPN1P18031 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.35□□□□□ -1.39
PTPN1P18031 AC079807.1-201ENST00000429993 481 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms