Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 VN1R83P-201ENST00000595685 445 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC007038.2-201ENST00000608095 740 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 SNORD91A-202ENST00000609620 191 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AC011815.3-201ENST00000624194 473 ntBASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CSB-PGBD3P0DP91 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 Y_RNA.248-201ENST00000364501 109 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 MOB4-205ENST00000409916 829 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 HSPE1P16-201ENST00000426640 348 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 MTND3P23-201ENST00000431980 347 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 RPL36AP39-201ENST00000445859 318 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC233982.1-201ENST00000451247 436 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC234781.3-201ENST00000452540 973 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AL035407.2-201ENST00000454090 378 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC011476.1-201ENST00000466725 307 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 UBFD1P1-201ENST00000473259 814 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 CDH12P2-201ENST00000504393 298 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 RNA5SP434-201ENST00000516647 121 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 NBEAP1-201ENST00000554452 979 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC051619.2-201ENST00000559063 397 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 CYP2C60P-201ENST00000566088 139 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC022662.1-201ENST00000580252 331 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC073544.2-201ENST00000601155 540 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 DUXAP11-201ENST00000603858 526 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AL109618.2-201ENST00000605527 211 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 MIR6826-201ENST00000617808 98 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC104985.2-201ENST00000620598 500 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 AC024023.1-201ENST00000624530 922 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 5S_rRNA.28-201ENST00000638107 119 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 DDX18P6-201ENST00000450119 1997 ntBASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CSB-PGBD3P0DP91 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.4□□□□□ -1.07
CSB-PGBD3P0DP91 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
CSB-PGBD3P0DP91 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CSB-PGBD3P0DP91 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.4□□□□□ -1.07
CSB-PGBD3P0DP91 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.4□□□□□ -1.07
CSB-PGBD3P0DP91 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
CSB-PGBD3P0DP91 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CSB-PGBD3P0DP91 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
CSB-PGBD3P0DP91 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms