Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 AC015871.5-202ENST00000623252 701 ntBASIC5.66□□□□□ -1.5
CCDC172P0C7W6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC172P0C7W6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 MIR133B-201ENST00000362210 119 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 RNU1-74P-201ENST00000384108 171 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 MIR105-1-201ENST00000385222 81 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AC007738.1-201ENST00000413892 348 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 GTF3AP5-201ENST00000442645 697 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 NOP56P2-201ENST00000447491 769 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 YWHAEP1-201ENST00000453697 763 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AC125612.1-201ENST00000547580 377 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 RN7SL435P-201ENST00000584418 282 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 AC127024.6-201ENST00000621598 424 ntBASIC5.65□□□□□ -1.5
CCDC172P0C7W6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC172P0C7W6 AL606537.1-201ENST00000607258 2011 ntBASIC5.65□□□□□ -1.51
CCDC172P0C7W6 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC172P0C7W6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
CCDC172P0C7W6 AC114947.2-201ENST00000565748 2125 ntBASIC5.65□□□□□ -1.51
CCDC172P0C7W6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC172P0C7W6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC172P0C7W6 AC092111.2-201ENST00000611627 1414 ntBASIC5.65□□□□□ -1.51
CCDC172P0C7W6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC172P0C7W6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL672167.1-204ENST00000641875 3017 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 OR52B1P-201ENST00000316506 909 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 RN7SKP124-201ENST00000364730 341 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 MIR621-201ENST00000384919 96 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL078599.1-201ENST00000402075 293 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL391422.1-201ENST00000402155 436 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AC009238.2-201ENST00000431026 355 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AC073587.1-201ENST00000447093 876 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 RPS27AP2-201ENST00000457576 465 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL133445.1-201ENST00000467051 452 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AC100832.1-201ENST00000471945 383 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AC022404.1-201ENST00000555320 273 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AC135626.1-201ENST00000556983 435 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AC018695.5-201ENST00000605872 315 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 MIR8080-201ENST00000622224 89 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 MIR1910-201ENST00000636955 80 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 MIPEPP2-201ENST00000422560 1819 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 CASC19-255ENST00000641733 1385 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 OR51C1P-202ENST00000641159 1444 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 AL450345.1-202ENST00000605741 3881 ntBASIC5.64□□□□□ -1.51
CCDC172P0C7W6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC172P0C7W6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 RNF19BPY-201ENST00000458209 1550 ntBASIC5.63□□□□□ -1.51
CCDC172P0C7W6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC172P0C7W6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms