Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HMGB1P09429 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGB1P09429 RNU11-201ENST00000387069 134 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 MTND2P15-201ENST00000418575 892 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGB1P09429 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGB1P09429 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGB1P09429 RPS12P17-201ENST00000438591 377 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGB1P09429 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 YRDCP3-201ENST00000456507 480 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGB1P09429 AC023194.2-201ENST00000465398 406 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGB1P09429 RPEP1-201ENST00000504507 658 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 IGBP1P5-201ENST00000507524 1000 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 SCARNA18.1-201ENST00000516330 83 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.98□□□□□ -1.29
HMGB1P09429 AC010306.1-201ENST00000523223 1117 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGB1P09429 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.98□□□□□ -1.29
HMGB1P09429 AP000916.1-201ENST00000533869 835 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.98□□□□□ -1.29
HMGB1P09429 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.98□□□□□ -1.29
HMGB1P09429 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 AC007956.1-201ENST00000555623 542 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 ATP5F1P7-201ENST00000567330 760 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 HNRNPCP4-201ENST00000571636 900 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGB1P09429 AL360012.1-201ENST00000602813 131 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 AC005972.3-201ENST00000606304 481 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 MIR6809-201ENST00000612189 116 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 AL021918.2-201ENST00000613415 194 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGB1P09429 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGB1P09429 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HMGB1P09429 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGB1P09429 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.98□□□□□ -1.29
HMGB1P09429 AC022031.1-201ENST00000585985 2593 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGB1P09429 AL137141.1-201ENST00000624622 4836 ntBASIC6.98□□□□□ -1.29
HMGB1P09429 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGB1P09429 PCAT14-202ENST00000627127 3935 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 CASC19-221ENST00000641309 1382 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HMGB1P09429 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HMGB1P09429 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGB1P09429 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HMGB1P09429 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGB1P09429 COX6B1P3-201ENST00000312310 260 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGB1P09429 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGB1P09429 AC021876.1-201ENST00000425959 359 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGB1P09429 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HMGB1P09429 CEACAMP1-201ENST00000434624 1035 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGB1P09429 FRG2FP-204ENST00000453982 852 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGB1P09429 RNU1-88P-201ENST00000459274 128 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 LSM3P4-201ENST00000502948 309 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGB1P09429 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGB1P09429 EIF3KP3-201ENST00000514461 639 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGB1P09429 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGB1P09429 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.97□□□□□ -1.29
HMGB1P09429 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.97□□□□□ -1.29
HMGB1P09429 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.97□□□□□ -1.29
HMGB1P09429 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.97□□□□□ -1.29
HMGB1P09429 MTND4LP25-201ENST00000570218 163 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGB1P09429 AC008507.3-201ENST00000585753 472 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 AL158152.1-201ENST00000602652 1435 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 AC133552.5-201ENST00000604266 540 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HMGB1P09429 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.97□□□□□ -1.29
HMGB1P09429 FRG1HP-204ENST00000617940 757 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGB1P09429 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.97□□□□□ -1.29
HMGB1P09429 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
HMGB1P09429 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGB1P09429 LINC01963-201ENST00000562038 3148 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGB1P09429 SSXP3-201ENST00000442971 1300 ntBASIC6.97□□□□□ -1.29
HMGB1P09429 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGB1P09429 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGB1P09429 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
HMGB1P09429 AC119744.1-201ENST00000454746 1715 ntBASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms