Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC011005.3-201ENST00000491624 395 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.06□□□□□ -1.44
COL1A1P02452 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.06□□□□□ -1.44
COL1A1P02452 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.06□□□□□ -1.44
COL1A1P02452 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.06□□□□□ -1.44
COL1A1P02452 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.06□□□□□ -1.44
COL1A1P02452 AC020910.3-201ENST00000603701 874 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.06□□□□□ -1.44
COL1A1P02452 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.06□□□□□ -1.44
COL1A1P02452 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.06□□□□□ -1.44
COL1A1P02452 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.06□□□□□ -1.44
COL1A1P02452 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.06□□□□□ -1.44
COL1A1P02452 CASC19-260ENST00000641828 2001 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 ABCC13-202ENST00000463099 3842 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.06□□□□□ -1.44
COL1A1P02452 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.06□□□□□ -1.44
COL1A1P02452 ZNF652P1-201ENST00000442420 1309 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COL1A1P02452 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL1A1P02452 SAMMSON-226ENST00000642089 1582 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
COL1A1P02452 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.05□□□□□ -1.44
COL1A1P02452 AL021331.1-201ENST00000402817 582 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 AL035079.1-201ENST00000405210 287 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 AL354766.1-201ENST00000423396 542 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.05□□□□□ -1.44
COL1A1P02452 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.05□□□□□ -1.44
COL1A1P02452 AC010733.1-201ENST00000451515 401 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.05□□□□□ -1.44
COL1A1P02452 RN7SL354P-201ENST00000469282 294 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.05□□□□□ -1.44
COL1A1P02452 RN7SL244P-201ENST00000493405 297 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
COL1A1P02452 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.05□□□□□ -1.44
COL1A1P02452 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.05□□□□□ -1.44
COL1A1P02452 AC034205.1-201ENST00000520621 638 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.05□□□□□ -1.44
COL1A1P02452 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.05□□□□□ -1.44
COL1A1P02452 MIR4284-201ENST00000578924 81 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 RNA5SP439-201ENST00000617595 124 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 AP001153.1-201ENST00000641024 338 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 AC239868.2-201ENST00000564237 4527 ntBASIC6.05□□□□□ -1.44
COL1A1P02452 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.05□□□□□ -1.44
COL1A1P02452 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL1A1P02452 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL1A1P02452 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL1A1P02452 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.04□□□□□ -1.44
COL1A1P02452 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
COL1A1P02452 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 LRRC37BP1-201ENST00000398851 714 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 RPL18P10-201ENST00000425606 538 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.04□□□□□ -1.44
COL1A1P02452 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.04□□□□□ -1.44
COL1A1P02452 AC068587.1-201ENST00000483613 781 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.04□□□□□ -1.44
COL1A1P02452 AC097486.1-201ENST00000515331 210 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.04□□□□□ -1.44
COL1A1P02452 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.04□□□□□ -1.44
COL1A1P02452 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.04□□□□□ -1.44
COL1A1P02452 DPPA3P2-201ENST00000553589 478 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.04□□□□□ -1.44
COL1A1P02452 AC105129.1-201ENST00000560250 297 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.04□□□□□ -1.44
COL1A1P02452 AC136624.4-201ENST00000573044 370 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 PRPF19P1-201ENST00000584766 898 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 AC104687.2-201ENST00000604442 342 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 AC026367.3-201ENST00000619032 590 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.04□□□□□ -1.44
COL1A1P02452 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL1A1P02452 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL1A1P02452 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.04□□□□□ -1.44
COL1A1P02452 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
COL1A1P02452 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 SMG1P7-201ENST00000565246 2704 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL1A1P02452 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 AC093297.3-201ENST00000607056 2517 ntBASIC6.04□□□□□ -1.44
COL1A1P02452 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.04□□□□□ -1.44
COL1A1P02452 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL1A1P02452 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL1A1P02452 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.03□□□□□ -1.44
COL1A1P02452 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL1A1P02452 AC068538.1-201ENST00000376856 336 ntBASIC6.03□□□□□ -1.44
COL1A1P02452 SNORA48.4-201ENST00000391089 134 ntBASIC6.03□□□□□ -1.44
COL1A1P02452 HYALP1-201ENST00000417674 1279 ntBASIC6.03□□□□□ -1.44
COL1A1P02452 RPL5P2-201ENST00000429598 854 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms