Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 CYCSP40-201ENST00000575927 294 ntBASIC5.09□□□□□ -1.59
SNX3O60493 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SNX3O60493 AC012616.1-201ENST00000600294 197 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AL023583.1-201ENST00000607518 1143 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AL353600.1-201ENST00000608148 251 ntBASIC5.09□□□□□ -1.59
SNX3O60493 uc_338.31-201ENST00000615595 186 ntBASIC5.09□□□□□ -1.59
SNX3O60493 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.09□□□□□ -1.59
SNX3O60493 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
SNX3O60493 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX3O60493 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SNX3O60493 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SNX3O60493 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
SNX3O60493 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SNX3O60493 AL672167.1-205ENST00000641112 3080 ntBASIC5.08□□□□□ -1.6
SNX3O60493 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SNX3O60493 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX3O60493 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SNX3O60493 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX3O60493 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX3O60493 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX3O60493 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX3O60493 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX3O60493 GCNT1P4-201ENST00000404096 329 ntBASIC5.08□□□□□ -1.6
SNX3O60493 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.08□□□□□ -1.6
SNX3O60493 AC127526.2-201ENST00000426436 775 ntBASIC5.08□□□□□ -1.6
SNX3O60493 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX3O60493 DSTNP5-201ENST00000427921 523 ntBASIC5.08□□□□□ -1.6
SNX3O60493 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.08□□□□□ -1.6
SNX3O60493 COX6CP13-201ENST00000428703 226 ntBASIC5.08□□□□□ -1.6
SNX3O60493 GSTM5P1-201ENST00000434751 660 ntBASIC5.08□□□□□ -1.6
SNX3O60493 Z84478.1-201ENST00000438230 1219 ntBASIC5.08□□□□□ -1.6
SNX3O60493 AL691517.1-201ENST00000440833 1235 ntBASIC5.08□□□□□ -1.6
SNX3O60493 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX3O60493 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX3O60493 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.08□□□□□ -1.6
SNX3O60493 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX3O60493 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.08□□□□□ -1.6
SNX3O60493 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX3O60493 UGT2A3P7-201ENST00000510485 734 ntBASIC5.08□□□□□ -1.6
SNX3O60493 FABP5P6-201ENST00000510588 409 ntBASIC5.08□□□□□ -1.6
SNX3O60493 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX3O60493 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX3O60493 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX3O60493 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX3O60493 AC008126.1-201ENST00000549019 480 ntBASIC5.08□□□□□ -1.6
SNX3O60493 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX3O60493 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX3O60493 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX3O60493 MRPS21P7-201ENST00000566937 238 ntBASIC5.08□□□□□ -1.6
SNX3O60493 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 MIMT1-201ENST00000597105 1050 ntBASIC5.08□□□□□ -1.6
SNX3O60493 BNIP3P35-201ENST00000604530 490 ntBASIC5.08□□□□□ -1.6
SNX3O60493 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX3O60493 MIR6823-201ENST00000622118 61 ntBASIC5.08□□□□□ -1.6
SNX3O60493 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX3O60493 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX3O60493 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.08□□□□□ -1.6
SNX3O60493 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX3O60493 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX3O60493 UGT2B26P-201ENST00000508672 1613 ntBASIC5.08□□□□□ -1.6
SNX3O60493 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SNX3O60493 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.07□□□□□ -1.6
SNX3O60493 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 RBPJP2-201ENST00000618187 1444 ntBASIC5.07□□□□□ -1.6
SNX3O60493 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.07□□□□□ -1.6
SNX3O60493 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 TMSB4XP2-201ENST00000335179 210 ntBASIC5.07□□□□□ -1.6
SNX3O60493 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 RNA5SP273-201ENST00000362484 113 ntBASIC5.07□□□□□ -1.6
SNX3O60493 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 CCNB2P1-201ENST00000399411 1150 ntBASIC5.07□□□□□ -1.6
SNX3O60493 OR7E101P-201ENST00000400428 513 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AL592291.1-201ENST00000403830 352 ntBASIC5.07□□□□□ -1.6
SNX3O60493 GAPDHP42-201ENST00000406848 981 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AC245060.4-201ENST00000413293 1121 ntBASIC5.07□□□□□ -1.6
SNX3O60493 OR2AT2P-201ENST00000413438 905 ntBASIC5.07□□□□□ -1.6
SNX3O60493 PTP4A1P1-201ENST00000420539 515 ntBASIC5.07□□□□□ -1.6
SNX3O60493 SRSF1P1-201ENST00000424058 520 ntBASIC5.07□□□□□ -1.6
SNX3O60493 FAR1P1-201ENST00000427163 934 ntBASIC5.07□□□□□ -1.6
SNX3O60493 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 MTND4LP14-201ENST00000429447 288 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AC092447.2-201ENST00000435487 669 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms