Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.51□□□□□ -1.53
SMAD6O43541 CD24P2-201ENST00000565486 219 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.51□□□□□ -1.53
SMAD6O43541 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 VN1R87P-201ENST00000596706 487 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 ABI1P1-201ENST00000603375 1120 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 AL512329.2-201ENST00000607350 548 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 AF129408.1-201ENST00000608767 431 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 AL356863.1-201ENST00000623378 1080 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 AC097372.4-201ENST00000625025 466 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.51□□□□□ -1.53
SMAD6O43541 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SMAD6O43541 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SMAD6O43541 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 RNA5SP453-201ENST00000362503 119 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 U3.2-201ENST00000362981 210 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SMAD6O43541 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 RN7SKP278-201ENST00000410504 342 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.5□□□□□ -1.53
SMAD6O43541 GTF2IP5-201ENST00000414608 731 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AL158827.1-201ENST00000416300 391 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 MTCO2P1-201ENST00000424648 477 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 RPL5P2-201ENST00000429598 854 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 MTATP6P14-201ENST00000455189 673 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 RN7SL188P-201ENST00000469842 285 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 RNA5SP92-201ENST00000516437 110 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 RNU4-18P-201ENST00000516751 149 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.5□□□□□ -1.53
SMAD6O43541 OR8G3P-201ENST00000533406 921 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SMAD6O43541 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.5□□□□□ -1.53
SMAD6O43541 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 OR11H3P-201ENST00000554547 982 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.5□□□□□ -1.53
SMAD6O43541 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.5□□□□□ -1.53
SMAD6O43541 RPL10P14-201ENST00000565265 298 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AC106730.2-201ENST00000566641 540 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AC104072.1-201ENST00000568817 668 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 MTATP6P24-201ENST00000576835 677 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.5□□□□□ -1.53
SMAD6O43541 AC114878.2-201ENST00000604863 1251 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AC015849.6-201ENST00000605454 474 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.5□□□□□ -1.53
SMAD6O43541 AC009974.1-201ENST00000608881 455 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AL356608.1-201ENST00000610034 820 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AC135068.5-201ENST00000624197 983 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AC120349.3-201ENST00000624377 529 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AC099654.9-201ENST00000637055 678 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 AL445984.1-201ENST00000637834 659 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.5□□□□□ -1.53
SMAD6O43541 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SMAD6O43541 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 CASC19-260ENST00000641828 2001 ntBASIC5.5□□□□□ -1.53
SMAD6O43541 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMAD6O43541 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SMAD6O43541 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.5□□□□□ -1.53
SMAD6O43541 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
SMAD6O43541 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.49□□□□□ -1.53
SMAD6O43541 SMG1P7-201ENST00000565246 2704 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMAD6O43541 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMAD6O43541 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.49□□□□□ -1.53
SMAD6O43541 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
SMAD6O43541 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMAD6O43541 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMAD6O43541 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SMAD6O43541 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.49□□□□□ -1.53
SMAD6O43541 USP12PY-201ENST00000427677 1064 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 AC245047.2-201ENST00000441060 530 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 AL672138.1-201ENST00000450604 1015 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SMAD6O43541 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.49□□□□□ -1.53
SMAD6O43541 RN7SL799P-201ENST00000475891 298 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 RPL7P39-201ENST00000481157 744 ntBASIC5.49□□□□□ -1.53
SMAD6O43541 AC008953.1-201ENST00000497334 318 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms