Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SMIM28A0A1B0GU29 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 AL035419.1-201ENST00000397037 564 ntBASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 AL021331.1-201ENST00000402817 582 ntBASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 RPL12P43-201ENST00000420608 499 ntBASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 AL360081.1-201ENST00000428299 555 ntBASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 HMGB1P4-201ENST00000455362 567 ntBASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 AL512310.9-201ENST00000553311 948 ntBASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 NDUFB4P11-201ENST00000560510 395 ntBASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 AC005377.1-201ENST00000605126 456 ntBASIC5.4□□□□□ -1.54
SMIM28A0A1B0GU29 OFD1P17-201ENST00000437639 3018 ntBASIC5.4□□□□□ -1.55
SMIM28A0A1B0GU29 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMIM28A0A1B0GU29 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMIM28A0A1B0GU29 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SMIM28A0A1B0GU29 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMIM28A0A1B0GU29 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SMIM28A0A1B0GU29 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMIM28A0A1B0GU29 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.4□□□□□ -1.55
SMIM28A0A1B0GU29 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMIM28A0A1B0GU29 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 MTCO1P46-201ENST00000451639 1491 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 SNORA70.10-201ENST00000384515 134 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 AL136116.2-201ENST00000404020 785 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 U3.32-201ENST00000408116 212 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 AC008072.1-201ENST00000434254 824 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 AL450023.3-201ENST00000440592 271 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 TXNP5-201ENST00000441043 315 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 RPL5P12-201ENST00000477071 851 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 GAPDHP56-201ENST00000506031 988 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 BGLT3-201ENST00000564523 994 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 AL031320.1-201ENST00000604177 357 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 AC091932.2-201ENST00000623014 291 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 AP001153.1-201ENST00000641024 338 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 SAMM50P1-201ENST00000455403 1399 ntBASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMIM28A0A1B0GU29 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 HCFC2P1-201ENST00000392864 1592 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 AC005261.2-201ENST00000593427 4258 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 AL132656.3-201ENST00000606384 1595 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 AC132825.1-201ENST00000463573 2247 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 AC007618.1-201ENST00000366455 732 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 RNA5SP87-201ENST00000384155 118 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 HMGB3P7-201ENST00000400214 611 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 NPM1P38-201ENST00000403835 865 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 OR52J1P-201ENST00000450596 932 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 OR52E3P-201ENST00000452083 936 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 IGLV2-34-201ENST00000490007 283 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 RNU6-964P-201ENST00000516524 69 ntBASIC5.38□□□□□ -1.55
SMIM28A0A1B0GU29 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms