Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC233289.1-201ENST00000403700 508 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 RN7SKP216-201ENST00000411050 312 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 RBMY2KP-201ENST00000418221 992 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC093655.2-201ENST00000425735 631 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC073850.1-201ENST00000449243 255 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 SNORD125-201ENST00000459538 96 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC109462.1-201ENST00000491087 368 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 NDUFB5P1-201ENST00000508134 564 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 CDH12P4-201ENST00000517835 295 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 CDH12P3-201ENST00000517935 295 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 CDH12P1-201ENST00000518435 295 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AP000676.2-201ENST00000529711 301 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 OR5D15P-201ENST00000531671 942 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AP005403.1-201ENST00000579720 229 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 MIR4436B2-201ENST00000581415 91 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 MIR4436B1-201ENST00000583272 91 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AL049539.1-201ENST00000611964 459 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AP002799.1-201ENST00000623552 423 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 CYP4F35P-202ENST00000636121 390 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 AC009950.2-201ENST00000636548 183 ntBASIC5.4□□□□□ -1.54
TM9SF3Q9HD45 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
TM9SF3Q9HD45 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TM9SF3Q9HD45 HSPA8P18-201ENST00000439846 1928 ntBASIC5.4□□□□□ -1.55
TM9SF3Q9HD45 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TM9SF3Q9HD45 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
TM9SF3Q9HD45 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
TM9SF3Q9HD45 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TM9SF3Q9HD45 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.4□□□□□ -1.55
TM9SF3Q9HD45 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TM9SF3Q9HD45 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 STX3-208ENST00000641815 3236 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 OR55B1P-203ENST00000641518 2602 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 RNA5SP326-201ENST00000363209 110 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 SNORA70.6-201ENST00000383934 134 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 U3.36-201ENST00000408418 213 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 RPS11P7-201ENST00000442125 465 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AL672138.1-201ENST00000450604 1015 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AC017007.3-201ENST00000479865 435 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 RN7SKP66-201ENST00000516681 231 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 OR1F2P-201ENST00000570470 933 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 AC008833.1-201ENST00000611633 691 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.39□□□□□ -1.55
TM9SF3Q9HD45 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 Y_RNA.625-201ENST00000411256 107 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 RPL37P18-201ENST00000411602 243 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 GPS2P1-201ENST00000411761 986 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 CBX1P2-201ENST00000453841 458 ntBASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.38□□□□□ -1.55
TM9SF3Q9HD45 RPL7P6-201ENST00000480903 738 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms