Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC003973.3-201ENST00000624863 2822 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AP000866.6-201ENST00000638898 3579 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AC011379.1-201ENST00000508713 3025 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 U3.3-201ENST00000362986 216 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 MIR600-201ENST00000385007 98 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 RPL23AP56-201ENST00000460778 453 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AC027369.5-201ENST00000533838 755 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 OR2BH1P-201ENST00000608850 864 ntBASIC4.79□□□□□ -1.64
CHD8Q9HCK8 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.79□□□□□ -1.64
CHD8Q9HCK8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 NCOA4P3-201ENST00000513203 1877 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 LINC01616-201ENST00000561816 2280 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AL008638.3-201ENST00000623027 5182 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 U3.10-201ENST00000364459 214 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 MIR554-201ENST00000384874 96 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 RN7SKP114-201ENST00000410327 279 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AC073581.1-201ENST00000519036 575 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 NMNAT1P1-201ENST00000554095 876 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 MTND6P5-201ENST00000448266 512 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AP005432.2-201ENST00000608162 586 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 SALL4P7-201ENST00000555779 3120 ntBASIC4.78□□□□□ -1.64
CHD8Q9HCK8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.78□□□□□ -1.64
CHD8Q9HCK8 AC114876.1-201ENST00000490962 1366 ntBASIC4.78□□□□□ -1.65
CHD8Q9HCK8 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 PTMAP2-201ENST00000397627 327 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC058823.1-201ENST00000485315 474 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC023632.4-201ENST00000517783 191 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 OR5M2P-201ENST00000529003 936 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AL049779.3-201ENST00000557141 606 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC090948.2-201ENST00000607363 564 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 HSPD1P7-201ENST00000447985 1686 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms