Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC116917.1-201ENST00000520558 305 ntBASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 HMGB1P42-201ENST00000532126 553 ntBASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AC011500.1-201ENST00000601963 469 ntBASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AC005828.7-201ENST00000607331 556 ntBASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AP001437.1-201ENST00000608783 456 ntBASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AC104966.1-201ENST00000467010 1464 ntBASIC3.53□□□□□ -1.84
SND1-IT1Q9HBX3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SND1-IT1Q9HBX3 AC007996.1-201ENST00000620414 2821 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AL445437.1-201ENST00000623157 3087 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC126323.6-202ENST00000568092 3511 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 CASC19-284ENST00000642142 1868 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 MRE11P1-201ENST00000464884 2127 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 TMSB4XP2-201ENST00000335179 210 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RNU6-178P-201ENST00000384631 104 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AL359643.1-201ENST00000404109 423 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RN7SKP86-201ENST00000410454 332 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RN7SKP125-201ENST00000410481 302 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RN7SKP286-201ENST00000410894 299 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RPL36AP10-201ENST00000421785 322 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 NPM1P22-201ENST00000427761 952 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC093716.1-201ENST00000435923 377 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 CYCSP11-201ENST00000436426 315 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RPL35AP21-201ENST00000437667 333 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 CASP3P1-201ENST00000446037 609 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AL031584.1-201ENST00000447169 754 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC243772.1-201ENST00000451620 410 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 CEACAMP11-201ENST00000455211 583 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 LDHBP2-201ENST00000456969 1005 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC092754.1-201ENST00000472975 479 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC021006.1-201ENST00000489849 553 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RN7SL568P-201ENST00000493069 298 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RPL15P21-201ENST00000495592 567 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RFPL4AP5-201ENST00000514977 504 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 RNA5SP303-201ENST00000516192 130 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC105031.1-201ENST00000518550 476 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 MRPS16P1-201ENST00000523462 412 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AP000648.1-201ENST00000529682 397 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 NPM1P45-201ENST00000583151 559 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AL031601.1-201ENST00000605702 394 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC015914.2-201ENST00000618167 288 ntBASIC3.52□□□□□ -1.85
SND1-IT1Q9HBX3 AC005899.6-201ENST00000620729 297 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms