Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MTCO2P15-201ENST00000532655 656 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AL109741.3-201ENST00000561748 592 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC009094.1-201ENST00000564443 426 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 OR1E3-201ENST00000575608 948 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC005377.1-201ENST00000605126 456 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC108865.2-201ENST00000606881 432 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AL365181.4-201ENST00000609800 547 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC026124.2-201ENST00000621847 656 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AL357140.4-201ENST00000636827 412 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 AC139713.2-210ENST00000641741 992 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 NAMPTP1-201ENST00000440465 2514 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 BX284613.1-201ENST00000452221 1641 ntBASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
AMBRA1Q9C0C7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AL513185.3-201ENST00000433335 1300 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 RNU105B-201ENST00000364478 208 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 RNU6-1242P-201ENST00000391052 103 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 RN7SKP278-201ENST00000410504 342 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 MYL6P5-201ENST00000412707 459 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 ZNF885P-201ENST00000420174 1098 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 ETF1P3-201ENST00000430422 1160 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AC023512.1-201ENST00000444513 499 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 MRPL35P2-201ENST00000448009 511 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 TRY2P-201ENST00000448860 689 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 SDC4P-201ENST00000453285 601 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AC074386.1-201ENST00000476560 767 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 RNA5SP434-201ENST00000516647 121 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 IGKV3D-34-201ENST00000522638 302 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 OR8Q1P-201ENST00000526467 655 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AP001804.2-201ENST00000533932 910 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AL442163.2-201ENST00000553912 710 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 RBM22P1-201ENST00000578589 1214 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AP002906.1-201ENST00000603405 233 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AL451086.1-201ENST00000605596 223 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 uc_338.26-201ENST00000612659 160 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 uc_338.31-201ENST00000615595 186 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 SNX18P12-201ENST00000624821 759 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AC017037.3-201ENST00000625016 472 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 MTCO1P28-201ENST00000574177 1528 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 THAP12P9-201ENST00000503971 2360 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 ZNF876P-202ENST00000398732 1485 ntBASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.57□□□□□ -1.52
AMBRA1Q9C0C7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AMBRA1Q9C0C7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms