Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PPP2R5C-230ENST00000557714 536 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 EIF4EBP2P2-201ENST00000563883 333 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 KRT18P18-201ENST00000565278 1279 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC009063.3-201ENST00000565904 566 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SUB1P4-201ENST00000566062 339 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 USP2-AS1-204ENST00000577297 689 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR5186-201ENST00000577504 120 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC090312.1-201ENST00000580637 348 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC097641.2-201ENST00000581517 325 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR3131-201ENST00000583592 63 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RN7SL615P-201ENST00000584065 298 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZFR2-206ENST00000591712 364 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC007780.1-204ENST00000592030 773 ntTSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 DMAC2-214ENST00000595425 572 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01531-206ENST00000602653 892 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL589674.2-201ENST00000604304 337 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL158801.4-201ENST00000605294 459 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL022345.2-201ENST00000606307 135 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 Metazoa_SRP.154-201ENST00000615469 268 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL078604.3-201ENST00000615580 211 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC012531.4-201ENST00000616509 177 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC009133.4-201ENST00000619159 561 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 POLR2J3-221ENST00000621093 348 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 DDX41-219ENST00000629036 606 ntTSL 4 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL137790.1-201ENST00000634283 177 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR4496-201ENST00000635896 61 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 IL7-211ENST00000639719 597 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 WIPF2-207ENST00000583130 1529 ntAPPRIS P2 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CYP4A22-207ENST00000620131 1760 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC026362.2-201ENST00000624878 5566 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC092017.4-202ENST00000638931 2006 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF207-201ENST00000321233 2283 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CTCFL-212ENST00000539382 2262 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC7A8-204ENST00000422941 3018 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 FXR1-201ENST00000305586 3277 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SLCO2B1-201ENST00000289575 4494 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 GFM1-210ENST00000486715 3721 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SNAP25-AS1-207ENST00000603542 3207 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 BEST1-201ENST00000378043 2740 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LTN1-203ENST00000389195 2714 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 IFIT3-201ENST00000371811 2455 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC007601.1-201ENST00000312019 1974 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 BCAT1-204ENST00000538118 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 UVSSA-201ENST00000324803 4441 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 NLRX1-203ENST00000409265 3665 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 KLHL20-201ENST00000209884 3421 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 THSD4-203ENST00000357769 3403 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AL161901.1-201ENST00000624954 3425 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PXYLP1-202ENST00000393010 3160 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC005332.5-201ENST00000591222 2919 ntBASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC068282.1-201ENST00000433673 2690 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 RALBP1-201ENST00000019317 4368 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ADSL-208ENST00000623063 4359 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 FOXN4-201ENST00000299162 3350 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 AC011467.1-201ENST00000562262 3355 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ERMARD-204ENST00000392095 1908 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC12A3-205ENST00000566786 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC01015-203ENST00000434657 2874 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MASP1-204ENST00000392470 1673 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ZC4H2-203ENST00000447788 2649 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 PAX6-243ENST00000638903 2620 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-4Q9BYR3 REN-201ENST00000272190 1447 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms