Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC093388.1-201ENST00000609166 430 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 uc_338.7-201ENST00000621834 124 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 MIR1193-201ENST00000408109 78 ntBASIC7.65□□□□□ -1.18
SCAPERQ9BY12 RSU1P3-201ENST00000412878 835 ntBASIC7.65□□□□□ -1.18
SCAPERQ9BY12 RPL23AP1-201ENST00000428990 471 ntBASIC7.65□□□□□ -1.18
SCAPERQ9BY12 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 CEACAMP6-201ENST00000452007 574 ntBASIC7.65□□□□□ -1.18
SCAPERQ9BY12 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 OR11I1P-201ENST00000486033 954 ntBASIC7.65□□□□□ -1.18
SCAPERQ9BY12 AC083829.1-201ENST00000503756 657 ntBASIC7.65□□□□□ -1.18
SCAPERQ9BY12 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 AP001357.1-201ENST00000586304 1053 ntBASIC7.65□□□□□ -1.18
SCAPERQ9BY12 AC011626.1-201ENST00000604710 562 ntBASIC7.65□□□□□ -1.18
SCAPERQ9BY12 MIR6830-201ENST00000636015 70 ntBASIC7.65□□□□□ -1.18
SCAPERQ9BY12 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
SCAPERQ9BY12 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SCAPERQ9BY12 AC139713.2-214ENST00000642059 1811 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 TTC41P-205ENST00000551270 3963 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 RNU4-39P-201ENST00000362455 127 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 AC073143.1-201ENST00000436316 395 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 RNA5SP392-201ENST00000516905 112 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 MIR3160-1-201ENST00000577972 85 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 AL109618.2-201ENST00000605527 211 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 MLECP1-201ENST00000615893 709 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 AL031658.2-201ENST00000616850 651 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 FTO-223ENST00000640179 210 ntTSL 5 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 AL591135.1-201ENST00000401578 5914 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 AC079298.1-201ENST00000625026 1619 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 MAPK10-304ENST00000641341 3984 ntBASIC7.64□□□□□ -1.19
SCAPERQ9BY12 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
SCAPERQ9BY12 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 OR4K15-201ENST00000305051 1216 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AL049697.2-201ENST00000403708 294 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 RNU4-25P-201ENST00000410569 230 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 RN7SKP106-201ENST00000410832 272 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AL592293.2-201ENST00000422292 996 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 NRBF2P3-201ENST00000432731 865 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AC010733.1-201ENST00000451515 401 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 snoU13.29-201ENST00000459370 104 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 RN7SL189P-201ENST00000468631 289 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 PPP1R11P1-201ENST00000486095 376 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 RN7SL814P-201ENST00000487715 300 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AL020997.2-201ENST00000602607 184 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AL121873.1-201ENST00000616013 524 ntBASIC7.63□□□□□ -1.19
SCAPERQ9BY12 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
SCAPERQ9BY12 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 MIR129-1-201ENST00000384972 72 ntBASIC7.62□□□□□ -1.19
SCAPERQ9BY12 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.62□□□□□ -1.19
SCAPERQ9BY12 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms