Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 UBE2V1P11-201ENST00000411559 285 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC245096.1-201ENST00000413104 546 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 RPS15AP30-201ENST00000420976 390 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AL034379.1-201ENST00000423216 253 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 RPS3AP38-201ENST00000435889 763 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 CUBNP2-201ENST00000443534 1139 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AL512593.1-201ENST00000444758 779 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC069540.1-201ENST00000446320 988 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 RPS4XP12-201ENST00000461747 709 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 TRBV5-2-201ENST00000489095 273 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 RNA5SP206-201ENST00000516703 121 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 OSBPL9P5-201ENST00000542581 171 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 RNU4ATAC-201ENST00000580972 127 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC068020.1-201ENST00000594215 661 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC006115.2-201ENST00000596823 202 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC130352.1-201ENST00000602979 661 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC104985.3-201ENST00000623479 597 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC079416.3-201ENST00000624479 549 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC007342.7-201ENST00000624610 2337 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC068137.4-201ENST00000638485 296 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC093849.1-201ENST00000563631 2209 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC092376.2-201ENST00000622621 4116 ntBASIC5.44□□□□□ -1.54
SNX18Q96RF0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SNX18Q96RF0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SNX18Q96RF0 AC018717.1-201ENST00000457712 1505 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AL049545.1-201ENST00000401856 572 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 GCNT1P4-201ENST00000404096 329 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 RN7SKP240-201ENST00000410583 375 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 SNRPFP2-201ENST00000440710 251 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AL096803.2-201ENST00000450032 677 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 RN7SL254P-201ENST00000460609 284 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC004263.1-201ENST00000479327 332 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC124945.1-201ENST00000485133 188 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.43□□□□□ -1.54
SNX18Q96RF0 CCDC11P1-201ENST00000503137 1162 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 OR7E128P-201ENST00000532736 1024 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 AC007834.2-201ENST00000536310 343 ntBASIC5.43□□□□□ -1.54
SNX18Q96RF0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms