Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AL359715.3-201ENST00000569267 2123 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 RNA5SP510-201ENST00000364697 99 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 RNA5SP30-201ENST00000365552 115 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC002524.1-201ENST00000411687 547 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 RPL26P37-201ENST00000411983 438 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC002069.1-201ENST00000429649 1159 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 RPS26P41-201ENST00000450370 284 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 OFD1P3Y-201ENST00000453312 783 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 NXT1P1-201ENST00000458481 316 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC092691.2-201ENST00000461787 803 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC008379.1-201ENST00000463655 464 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC116562.1-201ENST00000485355 781 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 RN7SL423P-201ENST00000486202 304 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 OR5H3P-201ENST00000502817 919 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC109481.1-201ENST00000509173 282 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 RNU6-615P-201ENST00000516065 106 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 HAUS1P3-201ENST00000523909 662 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC109635.6-201ENST00000525487 1113 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 PMS2P3-207ENST00000529061 717 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 IGBP1P1-201ENST00000554337 1009 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC021483.2-201ENST00000567415 758 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC063977.5-201ENST00000601044 974 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC078880.5-201ENST00000617845 421 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AP005431.1-201ENST00000618479 319 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 MIR1910-201ENST00000636955 80 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC132825.1-201ENST00000463573 2247 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 AC091305.2-201ENST00000624049 1576 ntBASIC6.35□□□□□ -1.39
CDK5RAP3Q96JB5 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC006484.1-201ENST00000435086 1884 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 RNU6-249P-201ENST00000363016 102 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 RNA5SP326-201ENST00000363209 110 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 RNU6-31P-201ENST00000384388 108 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC005042.1-201ENST00000393397 800 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 PEX12P1-201ENST00000400284 1048 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 OR2AT2P-201ENST00000413438 905 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 RNF10P1-201ENST00000418589 369 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC006994.1-201ENST00000438212 839 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC004854.1-201ENST00000440356 349 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 RPS10P18-201ENST00000442662 495 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC069277.2-201ENST00000454211 432 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC104982.1-201ENST00000478775 574 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 SYT14P1-201ENST00000481459 721 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 ATP5LP5-201ENST00000483050 299 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 RPS3AP15-201ENST00000483874 781 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 DUTP7-201ENST00000507982 486 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.34□□□□□ -1.39
CDK5RAP3Q96JB5 AC111000.6-201ENST00000514471 709 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms