Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.76□□□□□ -1.17
HLA-CQ95604 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 UBE2V1P5-201ENST00000440070 405 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 CYCSP44-201ENST00000448560 313 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.76□□□□□ -1.17
HLA-CQ95604 MTCO1P42-201ENST00000457379 726 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 MTND5P22-201ENST00000458380 195 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AC021205.1-201ENST00000468797 348 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 BTF3P13-201ENST00000513224 490 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-CQ95604 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
HLA-CQ95604 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AC008055.1-201ENST00000547032 609 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.76□□□□□ -1.17
HLA-CQ95604 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 AC004817.2-201ENST00000561794 651 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 BCRP9-201ENST00000605312 388 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AC048344.3-201ENST00000605512 251 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AC104237.2-201ENST00000612456 443 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AC078899.5-201ENST00000612475 178 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AC037198.3-201ENST00000616754 526 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 AC124319.3-201ENST00000616832 526 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.76□□□□□ -1.17
HLA-CQ95604 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 PARP4P1-201ENST00000435945 2337 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HLA-CQ95604 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC7.76□□□□□ -1.17
HLA-CQ95604 RBPJP7-201ENST00000442803 1447 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 RBPJP5-201ENST00000449433 1447 ntBASIC7.76□□□□□ -1.17
HLA-CQ95604 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-CQ95604 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.76□□□□□ -1.17
HLA-CQ95604 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.76□□□□□ -1.17
HLA-CQ95604 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.75□□□□□ -1.17
HLA-CQ95604 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-CQ95604 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-CQ95604 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
HLA-CQ95604 OR9K1P-201ENST00000326513 941 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 RNU4-7P-201ENST00000364758 141 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 RN7SKP208-201ENST00000365474 361 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 RNU6-639P-201ENST00000384074 107 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 RNU6-474P-201ENST00000384243 107 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.75□□□□□ -1.17
HLA-CQ95604 MIR1303-201ENST00000408625 86 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-CQ95604 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-CQ95604 AC104837.2-201ENST00000427236 424 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-CQ95604 RPEP2-201ENST00000432149 701 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.75□□□□□ -1.17
HLA-CQ95604 IFNA20P-201ENST00000436840 528 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 AC097527.1-201ENST00000437031 530 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-CQ95604 AC009518.3-201ENST00000438972 253 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-CQ95604 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-CQ95604 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-CQ95604 RPS27AP17-201ENST00000463344 455 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.75□□□□□ -1.17
HLA-CQ95604 AC015820.1-201ENST00000473882 321 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 RFPL4AP3-201ENST00000515267 345 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 Vault.3-201ENST00000516676 95 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 IGKV3-34-201ENST00000521692 293 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 AC005363.1-201ENST00000530779 351 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.75□□□□□ -1.17
HLA-CQ95604 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 XIAPP1-201ENST00000603162 600 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-CQ95604 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 AC093913.1-201ENST00000614178 329 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 AC018926.3-201ENST00000618841 406 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 MIR6503-201ENST00000622884 86 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 SNORA43.5-201ENST00000631270 138 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.75□□□□□ -1.17
HLA-CQ95604 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
HLA-CQ95604 OR8B9P-202ENST00000642028 5216 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 IMMTP1-201ENST00000435590 2219 ntBASIC7.75□□□□□ -1.17
HLA-CQ95604 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
HLA-CQ95604 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
HLA-CQ95604 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms