Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL078623.1-201ENST00000602702 907 ntBASIC6.14□□□□□ -1.43
NUP43Q8NFH3 ELOCP34-201ENST00000604436 327 ntBASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 MIR7854-201ENST00000620068 65 ntBASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AC005514.1-201ENST00000623521 208 ntBASIC6.14□□□□□ -1.43
NUP43Q8NFH3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AC116618.1-201ENST00000634617 774 ntBASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AL121936.2-201ENST00000641935 662 ntBASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AC010132.4-201ENST00000569883 1368 ntBASIC6.14□□□□□ -1.43
NUP43Q8NFH3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AC008957.3-201ENST00000624112 2242 ntBASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.14□□□□□ -1.43
NUP43Q8NFH3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUP43Q8NFH3 AL049634.1-201ENST00000453770 1720 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC009779.8-201ENST00000641684 4384 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 RN7SKP118-201ENST00000364331 330 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC007068.1-201ENST00000396690 844 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AL050335.1-201ENST00000396909 869 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 RNU2-18P-201ENST00000411224 162 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 TCEA1P4-201ENST00000415066 844 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AL359092.1-201ENST00000417156 265 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 USP9YP22-201ENST00000438971 294 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 FAR2P1-206ENST00000449736 709 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC003071.1-201ENST00000451219 789 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 RPSAP24-201ENST00000461543 873 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 RN7SL70P-201ENST00000478322 302 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 NPM1P27-201ENST00000502784 830 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 ARL2BPP4-201ENST00000506854 471 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC109471.1-201ENST00000511631 612 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC108120.2-201ENST00000512973 294 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC025881.1-201ENST00000518851 512 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC074029.1-201ENST00000552531 1044 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 RN7SL208P-201ENST00000577964 296 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC245052.7-201ENST00000601161 359 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC009220.3-201ENST00000604318 586 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AL683813.2-201ENST00000605245 502 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC069545.1-201ENST00000605671 358 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 TUG1_1.1-201ENST00000610654 145 ntBASIC6.13□□□□□ -1.43
NUP43Q8NFH3 AC023158.2-201ENST00000614876 543 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms