Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AP005435.3-201ENST00000531260 3198 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC109446.4-201ENST00000623235 2755 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 MIR16-2-201ENST00000362117 81 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 ATP5HP3-201ENST00000396994 486 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 RNA5SP431-201ENST00000410312 120 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL606495.1-201ENST00000422100 813 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL354707.3-201ENST00000427308 331 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL590399.2-201ENST00000427536 309 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC108479.1-201ENST00000431142 427 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC069154.1-201ENST00000432914 542 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 CYCSP11-201ENST00000436426 315 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 GSTA7P-201ENST00000438425 448 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL645936.1-201ENST00000441979 518 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 VN1R25P-201ENST00000443385 738 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL512593.1-201ENST00000444758 779 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 BET1P1-201ENST00000482276 359 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 RN7SL284P-201ENST00000498823 275 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC138866.2-201ENST00000508650 584 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 HSD3BP3-201ENST00000514706 994 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 IGLVIV-64-201ENST00000518581 301 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 MRPS21P8-201ENST00000569196 235 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 TXNP4-201ENST00000575018 310 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC020916.2-201ENST00000591242 360 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC108865.2-201ENST00000606881 432 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 uc_338.31-201ENST00000615595 186 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC068792.1-201ENST00000621354 417 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 MIR4302-201ENST00000638058 60 ntBASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC007996.1-201ENST00000620414 2821 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 OR5H2-201ENST00000355273 945 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 RNA5SP375-201ENST00000362975 119 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 RNU6-906P-201ENST00000384700 70 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 MIR513B-201ENST00000385136 84 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 MIR1302-8-201ENST00000408342 128 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC105402.1-201ENST00000413336 545 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms