Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 AL031658.2-201ENST00000616850 651 ntBASIC7.75□□□□□ -1.17
VPS8Q8N3P4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 AL031123.3-201ENST00000623345 1837 ntBASIC7.74□□□□□ -1.17
VPS8Q8N3P4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 SAMMSON-226ENST00000642089 1582 ntBASIC7.74□□□□□ -1.17
VPS8Q8N3P4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 MIR133A2-201ENST00000347538 102 ntBASIC7.74□□□□□ -1.17
VPS8Q8N3P4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 RPL7P58-201ENST00000402913 758 ntBASIC7.74□□□□□ -1.17
VPS8Q8N3P4 OR51B3P-201ENST00000412287 913 ntBASIC7.74□□□□□ -1.17
VPS8Q8N3P4 RSU1P3-201ENST00000412878 835 ntBASIC7.74□□□□□ -1.17
VPS8Q8N3P4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 AC093815.1-201ENST00000508637 280 ntBASIC7.74□□□□□ -1.17
VPS8Q8N3P4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 AC010424.2-201ENST00000607594 443 ntBASIC7.74□□□□□ -1.17
VPS8Q8N3P4 NLRP3P1-201ENST00000622303 1785 ntBASIC7.74□□□□□ -1.17
VPS8Q8N3P4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
VPS8Q8N3P4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AL360270.2-201ENST00000562952 5985 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 RNA5SP191-201ENST00000362585 102 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 PRPF38AP2-201ENST00000438179 851 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 MRPL35P2-201ENST00000448009 511 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AC010733.1-201ENST00000451515 401 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 RN7SL517P-201ENST00000462240 305 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AL671862.1-201ENST00000515851 349 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AC006349.1-201ENST00000555526 235 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 MIR4660-201ENST00000583549 74 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AP001521.2-201ENST00000608772 546 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AL049794.2-201ENST00000616301 365 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 BX005214.3-202ENST00000619809 325 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VPS8Q8N3P4 MAPK10-263ENST00000641052 4307 ntBASIC7.73□□□□□ -1.17
VPS8Q8N3P4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 GLUD1P9-201ENST00000420997 1173 ntBASIC7.72□□□□□ -1.17
VPS8Q8N3P4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 ENPP7P9-201ENST00000514456 627 ntBASIC7.72□□□□□ -1.17
VPS8Q8N3P4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 RN7SL802P-201ENST00000577858 299 ntBASIC7.72□□□□□ -1.17
VPS8Q8N3P4 AL512782.1-201ENST00000603093 364 ntBASIC7.72□□□□□ -1.17
VPS8Q8N3P4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.72□□□□□ -1.17
VPS8Q8N3P4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
VPS8Q8N3P4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.71□□□□□ -1.17
VPS8Q8N3P4 Z80107.2-201ENST00000445127 392 ntBASIC7.71□□□□□ -1.17
VPS8Q8N3P4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC7.71□□□□□ -1.17
VPS8Q8N3P4 RPL23AP53-201ENST00000521854 457 ntBASIC7.71□□□□□ -1.17
VPS8Q8N3P4 AL049839.1-201ENST00000556151 657 ntBASIC7.71□□□□□ -1.17
VPS8Q8N3P4 AC100827.5-201ENST00000615883 426 ntBASIC7.71□□□□□ -1.17
VPS8Q8N3P4 FRG1EP-201ENST00000634469 770 ntBASIC7.71□□□□□ -1.17
VPS8Q8N3P4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
VPS8Q8N3P4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
VPS8Q8N3P4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
VPS8Q8N3P4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms