Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 TNPO1P1-201ENST00000423641 1138 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 NPM1P22-201ENST00000427761 952 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 GAPDHP34-201ENST00000432112 823 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RPS29P10-201ENST00000439197 166 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RPS11P7-201ENST00000442125 465 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RN7SL51P-201ENST00000468230 285 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AC138866.2-201ENST00000508650 584 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RNA5SP373-201ENST00000517271 95 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RPL23AP53-201ENST00000521854 457 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 HMGB1P40-201ENST00000525121 540 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RBM22P1-201ENST00000578589 1214 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AC067773.1-201ENST00000603284 1094 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AL139407.1-201ENST00000613826 1175 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AL354950.1-201ENST00000614150 568 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AC022106.2-201ENST00000620114 757 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 CU639417.4-201ENST00000623928 207 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 TMEM30CP-203ENST00000637814 1035 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 MTND5P23-201ENST00000430812 1655 ntBASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NUDCD3Q8IVD9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC092747.4-201ENST00000620519 1861 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 UBBP2-201ENST00000376781 231 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 RNA5SP122-201ENST00000384457 108 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 CXADRP1-201ENST00000398098 1095 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL359643.1-201ENST00000404109 423 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 SNORA79B-201ENST00000410557 148 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 GABARAPL3-201ENST00000412799 354 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 EEF1B2P8-201ENST00000414101 671 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 DSTNP5-201ENST00000427921 523 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 SNRPFP2-201ENST00000440710 251 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL031584.1-201ENST00000447169 754 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC138938.1-201ENST00000515431 782 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC027308.1-201ENST00000517993 110 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC012400.1-201ENST00000518452 381 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL358913.1-201ENST00000554342 121 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC107958.1-201ENST00000556576 290 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL138895.2-201ENST00000603019 178 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC022960.2-201ENST00000616300 666 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 CXADRP3-202ENST00000617265 1100 ntBASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.07□□□□□ -1.6
NUDCD3Q8IVD9 AC107068.1-201ENST00000563286 4218 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms