Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 BMI1P1-201ENST00000445879 941 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 CDY20P-201ENST00000447528 1279 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 PTGES3P5-201ENST00000455109 434 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 OSTCP1-201ENST00000455507 450 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 CBX1P5-201ENST00000475330 559 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 RN7SL57P-201ENST00000493687 290 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 PFN1P8-201ENST00000497012 543 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 MTCO3P7-201ENST00000510008 774 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 SEC11B-201ENST00000518383 499 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC078899.1-201ENST00000521432 1185 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 CBX3P7-201ENST00000532876 502 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AGGF1P8-201ENST00000562979 1000 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 MIR4420-201ENST00000583944 77 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC067773.1-201ENST00000603284 1094 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AL133243.1-201ENST00000614487 366 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 ZNF876P-202ENST00000398732 1485 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC233289.1-201ENST00000403700 508 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 MIR1203-201ENST00000408812 85 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 RN7SKP278-201ENST00000410504 342 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 RNU4-72P-201ENST00000410754 173 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 MRPL53P1-201ENST00000414323 319 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 VN1R42P-201ENST00000424651 344 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 NPM1P26-201ENST00000426339 738 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 GAPDHP48-201ENST00000436626 961 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 TUBB4BP6-201ENST00000437576 479 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC023141.8-201ENST00000442554 208 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 TPTE2P6-202ENST00000445572 1007 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AL122020.1-201ENST00000472287 459 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC015864.1-201ENST00000496512 544 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 MTCO1P31-201ENST00000506355 492 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC109927.2-201ENST00000506416 303 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 HMGB1P47-201ENST00000511281 589 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 RNU6-964P-201ENST00000516524 69 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms