Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 SNORD56.6-201ENST00000384569 71 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 MIR223-201ENST00000385204 110 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 RPL19P16-201ENST00000433839 588 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 CYCSP6-201ENST00000434498 302 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC245028.2-201ENST00000458673 253 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC005532.2-201ENST00000467154 373 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 MYL12BP2-201ENST00000503948 512 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 RN7SKP99-201ENST00000517028 307 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 CDC42P3-201ENST00000518493 633 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 PPATP2-201ENST00000605635 508 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 BNIP3P7-201ENST00000605641 516 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC037198.3-201ENST00000616754 526 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 SOCS5P3-201ENST00000425115 1576 ntBASIC5.02□□□□□ -1.61
CCDC71Q8IV32 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC71Q8IV32 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 TCP1P3-201ENST00000414406 1498 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 RNU4-23P-201ENST00000362839 140 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AC017019.1-201ENST00000426129 261 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AL139148.1-201ENST00000427122 680 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AC006335.2-201ENST00000437993 330 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 EEF1B2P5-201ENST00000444820 548 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AURKAPS1-201ENST00000451805 1212 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 VDAC2P4-201ENST00000452925 711 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 RN7SL172P-201ENST00000460535 303 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 RPL15P21-201ENST00000495592 567 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 OR10D4P-201ENST00000525892 951 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 HAUS8P1-201ENST00000549005 542 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AC011270.1-201ENST00000558606 583 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AP000769.2-201ENST00000602344 396 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AC005229.3-201ENST00000603438 323 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AF117829.2-201ENST00000619538 361 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 TRIM51GP-201ENST00000534741 1350 ntBASIC5.01□□□□□ -1.61
CCDC71Q8IV32 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC71Q8IV32 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms