Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RPS4XP4-201ENST00000443195 763 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 RPL7P42-201ENST00000481005 679 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AC019235.1-201ENST00000503847 207 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 RNA5SP135-201ENST00000517019 125 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 MTCO2P4-201ENST00000517968 247 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 RPL3P13-201ENST00000550415 216 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 DPPA3P2-202ENST00000557188 1219 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 MIR548Y-201ENST00000582739 110 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 MIR212-201ENST00000586026 110 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AL590282.1-201ENST00000610379 1136 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.6□□□□□ -1.19
RNF135Q8IUD6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF135Q8IUD6 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC137056.2-201ENST00000624055 1958 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC015689.2-201ENST00000528172 1738 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 CALM2P3-201ENST00000400429 449 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 FABP7P1-201ENST00000424004 391 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 NPM1P22-201ENST00000427761 952 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AL513175.1-201ENST00000431492 780 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 FTLP17-201ENST00000432567 525 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 CLUHP1-201ENST00000435012 1190 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC097173.1-201ENST00000505862 819 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC108120.1-201ENST00000506543 991 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 NDUFB4P2-201ENST00000509515 391 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 MTCO1P35-201ENST00000515270 228 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 Y_RNA.701-201ENST00000516812 110 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 POLR2KP1-201ENST00000553226 168 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC138915.2-201ENST00000569776 97 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC137800.2-201ENST00000574375 120 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 SS18L2P2-201ENST00000583960 235 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC008752.3-201ENST00000588113 712 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC010487.1-201ENST00000594408 1172 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC022432.1-201ENST00000595739 310 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 YWHAQP7-201ENST00000603536 658 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC008277.2-201ENST00000605196 797 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AL137000.1-201ENST00000610528 1244 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC008250.2-201ENST00000615261 205 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC108479.2-201ENST00000617314 601 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC025162.2-201ENST00000619602 560 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC136475.10-201ENST00000620253 385 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 AC140479.4-205ENST00000636339 820 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 MKI67P1-201ENST00000604297 1460 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 FLJ42393-201ENST00000623801 2270 ntBASIC7.59□□□□□ -1.19
RNF135Q8IUD6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF135Q8IUD6 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms