Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 AC105114.1-201ENST00000624795 1862 ntBASIC6.21□□□□□ -1.42
ATG4DQ86TL0 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 Z99496.1-201ENST00000469424 1477 ntBASIC6.21□□□□□ -1.42
ATG4DQ86TL0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.21□□□□□ -1.42
ATG4DQ86TL0 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 Z97989.1-201ENST00000531702 2421 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC020658.2-201ENST00000559030 4020 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL589993.1-201ENST00000407450 2524 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 OR10D1P-201ENST00000355343 936 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RNU6-353P-201ENST00000364266 108 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RN7SKP285-201ENST00000410137 318 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RN7SKP268-201ENST00000411107 316 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 ZYG11AP1-201ENST00000430329 837 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RPL22P17-201ENST00000438729 315 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 PCNPP2-201ENST00000441651 455 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 USP9YP15-201ENST00000442391 422 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL512593.1-201ENST00000444758 779 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RPS27AP2-201ENST00000457576 465 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RNU7-140P-201ENST00000459546 60 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC063955.1-201ENST00000462872 685 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC022336.1-201ENST00000475510 337 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC117395.1-201ENST00000487390 403 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC087752.2-201ENST00000521219 281 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 NPIPB14P-203ENST00000532298 987 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AP002453.2-201ENST00000533503 320 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 GTF2IP22-201ENST00000554443 182 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC090515.3-201ENST00000560431 315 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RPS3AP23-202ENST00000574601 686 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 BNIP3P26-201ENST00000600827 554 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL021368.3-201ENST00000607119 578 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC009233.1-201ENST00000616477 371 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC124864.2-201ENST00000624736 186 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 MIR665-201ENST00000635949 72 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL391261.1-201ENST00000555712 1479 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL451064.2-201ENST00000623514 1654 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 AL645937.1-201ENST00000641739 1652 ntBASIC6.2□□□□□ -1.42
ATG4DQ86TL0 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4DQ86TL0 DLEU2L-201ENST00000371086 3555 ntBASIC6.19□□□□□ -1.42
ATG4DQ86TL0 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.19□□□□□ -1.42
ATG4DQ86TL0 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms