Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHFQ7M4L6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHFQ7M4L6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 RNA5SP279-201ENST00000365513 117 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 RNU6-1005P-201ENST00000384519 107 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 RNA5SP105-201ENST00000391123 113 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 VN1R51P-201ENST00000411675 945 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 RPSAP35-201ENST00000413753 818 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 USP12PY-201ENST00000427677 1064 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 NDUFA5P10-201ENST00000432147 357 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 PNKDP1-201ENST00000435914 430 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 ATP5LP2-201ENST00000440646 311 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC093166.3-201ENST00000448785 303 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 OFD1P3Y-201ENST00000453312 783 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 NXT1P1-201ENST00000458481 316 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC104164.3-201ENST00000467363 1258 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 RPL21P18-201ENST00000469899 480 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 CBX1P5-201ENST00000475330 559 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 RN7SL570P-201ENST00000484405 292 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 UBE2V1P12-201ENST00000503954 474 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 RN7SKP34-201ENST00000516142 244 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 RN7SKP238-201ENST00000516483 249 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 RN7SKP35-201ENST00000517210 151 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 PCNAP4-201ENST00000532690 730 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC124283.4-201ENST00000581815 456 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC008507.3-201ENST00000585753 472 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC006116.5-201ENST00000591936 559 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC069431.2-201ENST00000604149 1099 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC124916.2-201ENST00000604416 224 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AL139124.1-201ENST00000609123 421 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC108673.3-201ENST00000609183 335 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 MIR6793-201ENST00000612376 63 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AP001052.1-201ENST00000626421 99 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC006927.4-201ENST00000639187 543 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC011503.2-201ENST00000594230 1500 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHFQ7M4L6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHFQ7M4L6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHFQ7M4L6 PWAR1-201ENST00000624188 2414 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHFQ7M4L6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.05□□□□□ -1.6
SHFQ7M4L6 AC012078.1-201ENST00000405035 1646 ntBASIC5.05□□□□□ -1.6
SHFQ7M4L6 MTND5P11-201ENST00000511037 1812 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHFQ7M4L6 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 AL034403.1-201ENST00000399414 885 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 HMGB3P19-201ENST00000403971 560 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AL355615.1-201ENST00000406187 641 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 MTCO2P8-201ENST00000412213 658 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 RPS6P23-201ENST00000413224 722 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AL445183.3-201ENST00000414168 502 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.04□□□□□ -1.6
SHFQ7M4L6 RPA2P2-201ENST00000419698 796 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 TCEA1P2-201ENST00000420496 906 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 MTCO2P23-201ENST00000425216 680 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 AC126120.1-201ENST00000431082 470 ntBASIC5.04□□□□□ -1.6
SHFQ7M4L6 MTCO1P43-201ENST00000431831 488 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms