Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 RN7SKP278-201ENST00000410504 342 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AL445183.3-201ENST00000414168 502 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC012075.1-201ENST00000436549 580 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 CYCSP51-201ENST00000443545 318 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AL591719.1-201ENST00000444669 744 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 RN7SL184P-201ENST00000488308 297 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC108693.1-201ENST00000496068 432 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC008429.4-201ENST00000521201 182 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 HAUS1P3-201ENST00000523909 662 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AL049872.1-201ENST00000556323 322 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC096996.1-201ENST00000563813 325 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC025165.5-201ENST00000602802 578 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC079395.2-201ENST00000610982 737 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 GTF2IP4-201ENST00000453092 2054 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 AC004656.1-201ENST00000568479 4951 ntBASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC62Q6P9F0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 RNA5SP131-201ENST00000365452 119 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 HMGB1P10-201ENST00000395823 563 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC005005.2-201ENST00000420779 380 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 OR2X1P-201ENST00000421144 687 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 TNPO1P1-201ENST00000423641 1138 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 DSTNP5-201ENST00000427921 523 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 RPL12P28-201ENST00000430852 489 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 RPS27P5-201ENST00000444247 244 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 MTCYBP35-201ENST00000503630 1137 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 RNU6-311P-201ENST00000516224 102 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 RN7SKP288-201ENST00000516227 268 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC244502.2-201ENST00000543361 851 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 DPPA3P2-202ENST00000557188 1219 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 MTCYBP23-201ENST00000558717 1102 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC083837.1-201ENST00000565297 2994 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AC007204.2-201ENST00000615022 616 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AL355493.4-201ENST00000618530 292 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AL121839.2-201ENST00000565058 6943 ntBASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC62Q6P9F0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CCDC62Q6P9F0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC62Q6P9F0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC62Q6P9F0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC62Q6P9F0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC62Q6P9F0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC62Q6P9F0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms