Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.65□□□□□ -1.67
H3F3AP84243 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.65□□□□□ -1.67
H3F3AP84243 AC040958.1-201ENST00000561102 201 ntBASIC4.65□□□□□ -1.67
H3F3AP84243 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.65□□□□□ -1.67
H3F3AP84243 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.65□□□□□ -1.67
H3F3AP84243 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.65□□□□□ -1.67
H3F3AP84243 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.65□□□□□ -1.67
H3F3AP84243 MIR6826-201ENST00000617808 98 ntBASIC4.65□□□□□ -1.67
H3F3AP84243 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.65□□□□□ -1.67
H3F3AP84243 AL355480.1-201ENST00000629041 99 ntBASIC4.65□□□□□ -1.67
H3F3AP84243 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.65□□□□□ -1.67
H3F3AP84243 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
H3F3AP84243 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
H3F3AP84243 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
H3F3AP84243 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
H3F3AP84243 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
H3F3AP84243 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
H3F3AP84243 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.64□□□□□ -1.67
H3F3AP84243 AL590763.1-201ENST00000398297 1545 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.64□□□□□ -1.67
H3F3AP84243 MIR600-201ENST00000385007 98 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
H3F3AP84243 COX5BP7-201ENST00000414780 274 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 AL355433.1-201ENST00000422804 300 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.64□□□□□ -1.67
H3F3AP84243 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.64□□□□□ -1.67
H3F3AP84243 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC012512.1-201ENST00000446594 718 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 AC108161.1-201ENST00000461060 402 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 RN7SL222P-201ENST00000476452 299 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 AC097173.1-201ENST00000505862 819 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.64□□□□□ -1.67
H3F3AP84243 RNA5SP34-201ENST00000516887 130 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.64□□□□□ -1.67
H3F3AP84243 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
H3F3AP84243 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC004825.1-201ENST00000555068 586 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC022884.2-201ENST00000578535 580 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 MIR3936-201ENST00000584304 110 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.64□□□□□ -1.67
H3F3AP84243 AC016542.2-201ENST00000624201 619 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
H3F3AP84243 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.64□□□□□ -1.67
H3F3AP84243 SAMMSON-227ENST00000642114 1199 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
H3F3AP84243 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
H3F3AP84243 ZNF733P-202ENST00000444809 1573 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
H3F3AP84243 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.64□□□□□ -1.67
H3F3AP84243 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.64□□□□□ -1.67
H3F3AP84243 DDX18P6-201ENST00000450119 1997 ntBASIC4.64□□□□□ -1.67
H3F3AP84243 MUC2-202ENST00000613187 4845 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.63□□□□□ -1.67
H3F3AP84243 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.63□□□□□ -1.67
H3F3AP84243 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 CR788268.1-201ENST00000603931 1809 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
H3F3AP84243 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
H3F3AP84243 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
H3F3AP84243 AL050305.1-201ENST00000399993 1230 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 CTSL3P-202ENST00000412179 788 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 HYALP1-201ENST00000417674 1279 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 MARK2P12-201ENST00000420129 585 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
H3F3AP84243 BX510359.3-201ENST00000422168 306 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 AC005033.1-201ENST00000428904 813 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 AC046176.1-201ENST00000435260 1170 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.63□□□□□ -1.67
H3F3AP84243 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.63□□□□□ -1.67
H3F3AP84243 AL163193.1-201ENST00000444895 788 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 FAR2P1-206ENST00000449736 709 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 AC009127.1-201ENST00000467090 155 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 RN7SL727P-201ENST00000482164 296 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.63□□□□□ -1.67
H3F3AP84243 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.63□□□□□ -1.67
H3F3AP84243 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.63□□□□□ -1.67
H3F3AP84243 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms