Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UBA52P62987 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.56□□□□□ -1.68
UBA52P62987 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.56□□□□□ -1.68
UBA52P62987 PPATP2-201ENST00000605635 508 ntBASIC4.56□□□□□ -1.68
UBA52P62987 AC116651.1-201ENST00000609724 556 ntBASIC4.56□□□□□ -1.68
UBA52P62987 AC090607.5-201ENST00000615692 224 ntBASIC4.56□□□□□ -1.68
UBA52P62987 AC136428.4-201ENST00000634254 1155 ntBASIC4.56□□□□□ -1.68
UBA52P62987 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.56□□□□□ -1.68
UBA52P62987 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.56□□□□□ -1.68
UBA52P62987 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.56□□□□□ -1.68
UBA52P62987 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.56□□□□□ -1.68
UBA52P62987 AL353796.1-201ENST00000561542 3241 ntBASIC4.56□□□□□ -1.68
UBA52P62987 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UBA52P62987 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
UBA52P62987 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UBA52P62987 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
UBA52P62987 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UBA52P62987 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.55□□□□□ -1.68
UBA52P62987 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
UBA52P62987 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.55□□□□□ -1.68
UBA52P62987 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.55□□□□□ -1.68
UBA52P62987 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.55□□□□□ -1.68
UBA52P62987 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 MIR130A-201ENST00000385274 89 ntBASIC4.55□□□□□ -1.68
UBA52P62987 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.55□□□□□ -1.68
UBA52P62987 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.55□□□□□ -1.68
UBA52P62987 RN7SKP125-201ENST00000410481 302 ntBASIC4.55□□□□□ -1.68
UBA52P62987 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 AC017019.1-201ENST00000426129 261 ntBASIC4.55□□□□□ -1.68
UBA52P62987 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 AC090018.1-201ENST00000434369 367 ntBASIC4.55□□□□□ -1.68
UBA52P62987 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.55□□□□□ -1.68
UBA52P62987 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.55□□□□□ -1.68
UBA52P62987 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 AL450023.1-201ENST00000450868 751 ntBASIC4.55□□□□□ -1.68
UBA52P62987 OTX2P1-201ENST00000450956 354 ntBASIC4.55□□□□□ -1.68
UBA52P62987 AURKAPS1-201ENST00000451805 1212 ntBASIC4.55□□□□□ -1.68
UBA52P62987 RPL7P45-201ENST00000455851 743 ntBASIC4.55□□□□□ -1.68
UBA52P62987 AP000942.1-201ENST00000463969 747 ntBASIC4.55□□□□□ -1.68
UBA52P62987 RPL15P21-201ENST00000495592 567 ntBASIC4.55□□□□□ -1.68
UBA52P62987 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.55□□□□□ -1.68
UBA52P62987 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.55□□□□□ -1.68
UBA52P62987 AC009237.13-201ENST00000603193 276 ntBASIC4.55□□□□□ -1.68
UBA52P62987 AC024940.4-201ENST00000605507 246 ntBASIC4.55□□□□□ -1.68
UBA52P62987 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.55□□□□□ -1.68
UBA52P62987 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.55□□□□□ -1.68
UBA52P62987 AC132068.1-201ENST00000623805 459 ntBASIC4.55□□□□□ -1.68
UBA52P62987 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.55□□□□□ -1.68
UBA52P62987 SMG1P7-201ENST00000565246 2704 ntBASIC4.55□□□□□ -1.68
UBA52P62987 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UBA52P62987 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UBA52P62987 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.55□□□□□ -1.68
UBA52P62987 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
UBA52P62987 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
UBA52P62987 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 LINC01963-201ENST00000562038 3148 ntBASIC4.54□□□□□ -1.68
UBA52P62987 MAPK10-320ENST00000641462 6696 ntBASIC4.54□□□□□ -1.68
UBA52P62987 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
UBA52P62987 MIR585-201ENST00000384887 94 ntBASIC4.54□□□□□ -1.68
UBA52P62987 RN7SKP213-201ENST00000410746 298 ntBASIC4.54□□□□□ -1.68
UBA52P62987 NIFKP3-201ENST00000417799 865 ntBASIC4.54□□□□□ -1.68
UBA52P62987 OR5M12P-201ENST00000423388 929 ntBASIC4.54□□□□□ -1.68
UBA52P62987 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.54□□□□□ -1.68
UBA52P62987 CYCSP6-201ENST00000434498 302 ntBASIC4.54□□□□□ -1.68
UBA52P62987 AP000547.1-201ENST00000454360 617 ntBASIC4.54□□□□□ -1.68
UBA52P62987 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
UBA52P62987 AC004453.1-201ENST00000487895 408 ntBASIC4.54□□□□□ -1.68
UBA52P62987 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.54□□□□□ -1.68
UBA52P62987 RPS12P31-201ENST00000491419 398 ntBASIC4.54□□□□□ -1.68
UBA52P62987 AC073358.1-201ENST00000505671 684 ntBASIC4.54□□□□□ -1.68
UBA52P62987 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.54□□□□□ -1.68
UBA52P62987 RNA5SP303-201ENST00000516192 130 ntBASIC4.54□□□□□ -1.68
UBA52P62987 RN7SKP253-201ENST00000516424 309 ntBASIC4.54□□□□□ -1.68
UBA52P62987 HMGB1P19-201ENST00000517578 577 ntBASIC4.54□□□□□ -1.68
UBA52P62987 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.54□□□□□ -1.68
UBA52P62987 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.54□□□□□ -1.68
UBA52P62987 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.54□□□□□ -1.68
UBA52P62987 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.54□□□□□ -1.68
UBA52P62987 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.54□□□□□ -1.68
UBA52P62987 AC011840.5-201ENST00000582125 771 ntBASIC4.54□□□□□ -1.68
UBA52P62987 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms