Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC004232.2-201ENST00000574245 821 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 MIR4701-201ENST00000583094 63 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.73□□□□□ -1.81
CKS1BP61024 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC3.73□□□□□ -1.81
CKS1BP61024 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC3.73□□□□□ -1.81
CKS1BP61024 WBP1LP12-201ENST00000604449 331 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC3.73□□□□□ -1.81
CKS1BP61024 AL135786.2-201ENST00000608422 615 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC3.73□□□□□ -1.81
CKS1BP61024 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CKS1BP61024 AL035461.2-201ENST00000619201 524 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 AL136228.1-201ENST00000622221 319 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 AP001052.1-201ENST00000626421 99 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC3.73□□□□□ -1.81
CKS1BP61024 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CKS1BP61024 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CKS1BP61024 AC003973.3-201ENST00000624863 2822 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 AL450345.1-202ENST00000605741 3881 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 AL592437.2-201ENST00000421655 2434 ntBASIC3.73□□□□□ -1.81
CKS1BP61024 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CKS1BP61024 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CKS1BP61024 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CKS1BP61024 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CKS1BP61024 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CKS1BP61024 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 AC017104.4-201ENST00000636283 1592 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.72□□□□□ -1.81
CKS1BP61024 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.72□□□□□ -1.81
CKS1BP61024 AC090017.1-201ENST00000548612 1779 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC3.72□□□□□ -1.81
CKS1BP61024 KARSP3-201ENST00000571212 1504 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CKS1BP61024 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 RNA5SP513-201ENST00000364648 118 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 MIR191-201ENST00000384873 92 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 RBBP4P5-201ENST00000398583 1266 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 HIST1H3PS1-201ENST00000404612 417 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AL009179.1-201ENST00000406085 265 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 NFU1P1-201ENST00000413128 774 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC3.72□□□□□ -1.81
CKS1BP61024 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.72□□□□□ -1.81
CKS1BP61024 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC3.72□□□□□ -1.81
CKS1BP61024 CYCSP24-201ENST00000445119 316 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC3.72□□□□□ -1.81
CKS1BP61024 AL358876.1-201ENST00000453364 1075 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC3.72□□□□□ -1.81
CKS1BP61024 RPL29P23-201ENST00000486188 442 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC112484.3-201ENST00000505910 329 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC016559.2-201ENST00000510759 359 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AK6-204ENST00000512561 587 ntTSL 5 BASIC3.72□□□□□ -1.81
CKS1BP61024 RN7SKP253-201ENST00000516424 309 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC021678.3-201ENST00000517893 476 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 MAL2-207ENST00000522828 603 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.72□□□□□ -1.81
CKS1BP61024 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.72□□□□□ -1.81
CKS1BP61024 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.72□□□□□ -1.81
CKS1BP61024 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 AL359715.3-201ENST00000569267 2123 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CKS1BP61024 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CKS1BP61024 APOC2-205ENST00000592257 444 ntTSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC025946.2-201ENST00000603398 234 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC022001.1-201ENST00000605193 268 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC015813.4-201ENST00000610469 179 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 MIR6793-201ENST00000612376 63 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AC015819.1-201ENST00000613588 663 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC3.72□□□□□ -1.81
CKS1BP61024 AL390318.1-201ENST00000624564 687 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC3.72□□□□□ -1.81
CKS1BP61024 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC3.72□□□□□ -1.81
CKS1BP61024 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 AC010329.2-201ENST00000595195 2737 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CKS1BP61024 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC3.72□□□□□ -1.81
CKS1BP61024 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CKS1BP61024 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CKS1BP61024 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
CKS1BP61024 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.72□□□□□ -1.81
CKS1BP61024 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC3.72□□□□□ -1.81
CKS1BP61024 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CKS1BP61024 AC235565.1-201ENST00000456962 1325 ntBASIC3.71□□□□□ -1.81
CKS1BP61024 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms