Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC011411.1-201ENST00000509592 876 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 RNA5SP249-201ENST00000516127 99 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 CYCSP22-201ENST00000517555 339 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 AC027308.1-201ENST00000517993 110 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN12P56749 NRBF2P4-201ENST00000520874 850 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN12P56749 HNRNPRP2-201ENST00000528421 743 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 EIF4A2P5-201ENST00000529914 499 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 AC005868.1-201ENST00000536421 331 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 BLZF2P-201ENST00000553776 1130 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.43□□□□□ -1.7
CLDN12P56749 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLDN12P56749 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN12P56749 AC022106.2-201ENST00000620114 757 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN12P56749 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN12P56749 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN12P56749 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLDN12P56749 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN12P56749 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN12P56749 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN12P56749 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN12P56749 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN12P56749 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN12P56749 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN12P56749 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.43□□□□□ -1.7
CLDN12P56749 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN12P56749 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN12P56749 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN12P56749 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CLDN12P56749 AC005332.5-201ENST00000591222 2919 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 LINC01355-201ENST00000566551 5444 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 BTBD10P1-201ENST00000549824 1352 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN12P56749 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 THAP12P8-201ENST00000447914 2115 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDN12P56749 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDN12P56749 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN12P56749 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN12P56749 RNA5SP90-201ENST00000364801 99 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN12P56749 RNU6-1320P-201ENST00000390838 107 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 RNU6-1269P-201ENST00000391139 107 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 AL596448.1-201ENST00000415024 392 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN12P56749 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN12P56749 AL138787.1-202ENST00000437804 898 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 RBMY2TP-201ENST00000451162 947 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN12P56749 RNU6-599P-201ENST00000459383 107 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 RNU6-1193P-201ENST00000459461 107 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 AL591473.1-201ENST00000464297 313 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN12P56749 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN12P56749 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN12P56749 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN12P56749 RN7SKP34-201ENST00000516142 244 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 RN7SKP183-201ENST00000517169 324 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 RNA5SP373-201ENST00000517271 95 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN12P56749 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN12P56749 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN12P56749 AC079600.1-201ENST00000550326 297 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN12P56749 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN12P56749 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN12P56749 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 AC018552.1-201ENST00000562099 811 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN12P56749 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 AC079315.1-201ENST00000602952 623 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 RNU6-368P-201ENST00000620928 107 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 RNU6-538P-201ENST00000622329 107 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN12P56749 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN12P56749 AL022322.2-201ENST00000624072 20397 ntBASIC4.42□□□□□ -1.7
CLDN12P56749 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.42□□□□□ -1.7
CLDN12P56749 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLDN12P56749 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLDN12P56749 AL672167.1-203ENST00000641299 2975 ntBASIC4.41□□□□□ -1.7
CLDN12P56749 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN12P56749 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CLDN12P56749 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN12P56749 CUL4AP1-201ENST00000514750 1863 ntBASIC4.41□□□□□ -1.7
CLDN12P56749 AC092747.4-201ENST00000620519 1861 ntBASIC4.41□□□□□ -1.7
CLDN12P56749 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CLDN12P56749 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms