Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
MSH6P52701 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MSH6P52701 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.13□□□□□ -1.27
MSH6P52701 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MSH6P52701 AC139713.2-214ENST00000642059 1811 ntBASIC7.13□□□□□ -1.27
MSH6P52701 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.13□□□□□ -1.27
MSH6P52701 MAPK10-338ENST00000641647 3362 ntBASIC7.13□□□□□ -1.27
MSH6P52701 AC138907.8-201ENST00000623981 2256 ntBASIC7.12□□□□□ -1.27
MSH6P52701 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 AL355834.1-201ENST00000556602 3965 ntBASIC7.12□□□□□ -1.27
MSH6P52701 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
MSH6P52701 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.12□□□□□ -1.27
MSH6P52701 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 RPL21P129-201ENST00000491732 478 ntBASIC7.12□□□□□ -1.27
MSH6P52701 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.12□□□□□ -1.27
MSH6P52701 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 AP001880.2-201ENST00000538233 448 ntBASIC7.12□□□□□ -1.27
MSH6P52701 AL109766.1-201ENST00000555080 552 ntBASIC7.12□□□□□ -1.27
MSH6P52701 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.12□□□□□ -1.27
MSH6P52701 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.12□□□□□ -1.27
MSH6P52701 AP003400.3-201ENST00000624904 346 ntBASIC7.12□□□□□ -1.27
MSH6P52701 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
MSH6P52701 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
MSH6P52701 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
MSH6P52701 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
MSH6P52701 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 UGT2B24P-201ENST00000514441 1597 ntBASIC7.12□□□□□ -1.27
MSH6P52701 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
MSH6P52701 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
MSH6P52701 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
MSH6P52701 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
MSH6P52701 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.11□□□□□ -1.27
MSH6P52701 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
MSH6P52701 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
MSH6P52701 AL592293.2-201ENST00000422292 996 ntBASIC7.11□□□□□ -1.27
MSH6P52701 CDC27P1-201ENST00000445384 715 ntBASIC7.11□□□□□ -1.27
MSH6P52701 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.11□□□□□ -1.27
MSH6P52701 OR52A4P-201ENST00000472867 958 ntBASIC7.11□□□□□ -1.27
MSH6P52701 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.11□□□□□ -1.27
MSH6P52701 AC006427.1-201ENST00000514359 712 ntBASIC7.11□□□□□ -1.27
MSH6P52701 MORF4L1P3-201ENST00000525966 950 ntBASIC7.11□□□□□ -1.27
MSH6P52701 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.11□□□□□ -1.27
MSH6P52701 AL356218.2-201ENST00000605264 187 ntBASIC7.11□□□□□ -1.27
MSH6P52701 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.11□□□□□ -1.27
MSH6P52701 AL121873.1-201ENST00000616013 524 ntBASIC7.11□□□□□ -1.27
MSH6P52701 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
MSH6P52701 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.11□□□□□ -1.27
MSH6P52701 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
MSH6P52701 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
MSH6P52701 AC010928.1-201ENST00000592477 1447 ntBASIC7.11□□□□□ -1.27
MSH6P52701 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
MSH6P52701 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
MSH6P52701 TTC41P-205ENST00000551270 3963 ntBASIC7.11□□□□□ -1.27
MSH6P52701 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.11□□□□□ -1.27
MSH6P52701 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
MSH6P52701 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.11□□□□□ -1.27
MSH6P52701 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
MSH6P52701 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.1□□□□□ -1.27
MSH6P52701 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
MSH6P52701 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
MSH6P52701 IGKV7-3-201ENST00000357453 298 ntBASIC7.1□□□□□ -1.27
MSH6P52701 RNU4-39P-201ENST00000362455 127 ntBASIC7.1□□□□□ -1.27
MSH6P52701 RN7SKP263-201ENST00000411194 309 ntBASIC7.1□□□□□ -1.27
MSH6P52701 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC7.1□□□□□ -1.27
MSH6P52701 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.1□□□□□ -1.27
MSH6P52701 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC7.1□□□□□ -1.27
MSH6P52701 AC013356.1-201ENST00000489027 564 ntBASIC7.1□□□□□ -1.27
MSH6P52701 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC7.1□□□□□ -1.27
MSH6P52701 RN7SKP276-201ENST00000516242 268 ntBASIC7.1□□□□□ -1.27
MSH6P52701 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.1□□□□□ -1.27
MSH6P52701 SOX5P1-201ENST00000524155 1127 ntBASIC7.1□□□□□ -1.27
MSH6P52701 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.1□□□□□ -1.27
MSH6P52701 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC7.1□□□□□ -1.27
MSH6P52701 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.1□□□□□ -1.27
MSH6P52701 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.1□□□□□ -1.27
MSH6P52701 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.1□□□□□ -1.27
MSH6P52701 AC093765.1-201ENST00000603758 881 ntBASIC7.1□□□□□ -1.27
MSH6P52701 AC098935.2-201ENST00000604222 466 ntBASIC7.1□□□□□ -1.27
MSH6P52701 MIR92B-201ENST00000607575 96 ntBASIC7.1□□□□□ -1.27
MSH6P52701 AP005432.2-201ENST00000608162 586 ntBASIC7.1□□□□□ -1.27
MSH6P52701 AL161637.1-201ENST00000622380 412 ntBASIC7.1□□□□□ -1.27
MSH6P52701 MTCO1P15-201ENST00000529569 1526 ntBASIC7.1□□□□□ -1.27
MSH6P52701 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.1□□□□□ -1.27
MSH6P52701 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.1□□□□□ -1.27
MSH6P52701 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
MSH6P52701 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms