Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CLCNKAP51800 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLCNKAP51800 AL138820.1-201ENST00000617901 5305 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
CLCNKAP51800 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 AL592494.2-201ENST00000425455 1548 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLCNKAP51800 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CLCNKAP51800 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLCNKAP51800 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLCNKAP51800 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLCNKAP51800 RNU6-1320P-201ENST00000390838 107 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 RNU6-1269P-201ENST00000391139 107 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLCNKAP51800 RN7SKP59-201ENST00000410520 314 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 TRIM60P17-201ENST00000415181 719 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.39□□□□□ -1.55
CLCNKAP51800 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 RNF19BPX-201ENST00000426224 625 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCNKAP51800 RPL12P17-201ENST00000432393 498 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 CYCSP12-201ENST00000437729 300 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCNKAP51800 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.39□□□□□ -1.55
CLCNKAP51800 AZGP1P2-201ENST00000454506 345 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 RNU6-599P-201ENST00000459383 107 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 RNU6-1193P-201ENST00000459461 107 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AC107015.1-201ENST00000466902 747 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 COPS8P2-201ENST00000473228 627 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AC104629.1-201ENST00000494226 508 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.39□□□□□ -1.55
CLCNKAP51800 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CLCNKAP51800 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCNKAP51800 RNU6-491P-201ENST00000516099 110 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 CKS1BP1-201ENST00000555221 240 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCNKAP51800 MIR4489-201ENST00000578869 62 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AP005403.1-201ENST00000579720 229 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCNKAP51800 FKBP1AP1-201ENST00000594588 318 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AC005776.1-201ENST00000603164 290 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 AC005840.5-201ENST00000619166 599 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 RNU6-368P-201ENST00000620928 107 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 RNU6-538P-201ENST00000622329 107 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 AL606537.1-201ENST00000607258 2011 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.39□□□□□ -1.55
CLCNKAP51800 AC004076.2-201ENST00000620532 3323 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 TCP11X1-202ENST00000622971 1372 ntBASIC5.39□□□□□ -1.55
CLCNKAP51800 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.39□□□□□ -1.55
CLCNKAP51800 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCNKAP51800 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLCNKAP51800 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
CLCNKAP51800 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLCNKAP51800 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLCNKAP51800 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCNKAP51800 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLCNKAP51800 AC007938.2-201ENST00000604666 2634 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.38□□□□□ -1.55
CLCNKAP51800 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCNKAP51800 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCNKAP51800 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCNKAP51800 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCNKAP51800 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLCNKAP51800 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLCNKAP51800 RNU6-40P-201ENST00000384254 107 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 SNORA5.1-201ENST00000384275 131 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 MIR1286-201ENST00000408112 78 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 RPL7P56-201ENST00000429441 717 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 IGBP1P3-201ENST00000447449 1000 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 AL672138.1-201ENST00000450604 1015 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCNKAP51800 RN7SL188P-201ENST00000469842 285 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 OR2AO1P-201ENST00000476497 403 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 RN7SL177P-201ENST00000476596 299 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 AC090543.1-201ENST00000492168 485 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 RN7SL447P-201ENST00000494711 245 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.38□□□□□ -1.55
CLCNKAP51800 HMGB1P44-201ENST00000508597 572 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.38□□□□□ -1.55
CLCNKAP51800 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.38□□□□□ -1.55
CLCNKAP51800 HMGN1P15-201ENST00000513870 295 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCNKAP51800 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.38□□□□□ -1.55
CLCNKAP51800 BLZF2P-201ENST00000553776 1130 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCNKAP51800 SNORD39.2-201ENST00000579995 76 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.38□□□□□ -1.55
CLCNKAP51800 BNIP3P35-201ENST00000604530 490 ntBASIC5.38□□□□□ -1.55
CLCNKAP51800 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCNKAP51800 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLCNKAP51800 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms