Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
CXCL12P48061 AL583832.1-201ENST00000603227 784 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 AC099654.6-201ENST00000636487 512 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL12P48061 AC073365.1-203ENST00000641055 1992 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.14□□□□□ -1.59
CXCL12P48061 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL12P48061 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL12P48061 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL12P48061 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL12P48061 AL034549.2-201ENST00000618285 3373 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CXCL12P48061 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 AC079298.1-201ENST00000625026 1619 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL12P48061 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 OR9G4-201ENST00000302957 984 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 RNU1-59P-201ENST00000364829 162 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 RNA5SP332-201ENST00000391063 115 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.13□□□□□ -1.59
CXCL12P48061 PPIAP9-201ENST00000403866 498 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL12P48061 AL354714.3-201ENST00000447284 493 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 OR1H1P-201ENST00000448731 937 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 RPL10P17-201ENST00000453852 316 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 RN7SL189P-201ENST00000468631 289 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 AC103987.1-201ENST00000473394 348 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL12P48061 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL12P48061 RN7SKP92-201ENST00000517266 244 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 AC022360.1-201ENST00000521058 340 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL12P48061 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL12P48061 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.13□□□□□ -1.59
CXCL12P48061 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CXCL12P48061 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL12P48061 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL12P48061 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.13□□□□□ -1.59
CXCL12P48061 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL12P48061 U1.25-201ENST00000614085 162 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 U1.34-201ENST00000618578 162 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 U1.31-201ENST00000620022 160 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 MTCO1P1-201ENST00000624263 1081 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CXCL12P48061 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.13□□□□□ -1.59
CXCL12P48061 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL12P48061 AC232271.1-201ENST00000602455 2715 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 AC018628.1-201ENST00000624147 3819 ntBASIC5.13□□□□□ -1.59
CXCL12P48061 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL12P48061 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.13□□□□□ -1.59
CXCL12P48061 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CXCL12P48061 AC140479.2-201ENST00000421567 3130 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 SAMMSON-226ENST00000642089 1582 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CXCL12P48061 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL12P48061 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL12P48061 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CXCL12P48061 AC015813.6-201ENST00000624409 5808 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL12P48061 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL12P48061 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL12P48061 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL12P48061 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CXCL12P48061 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CXCL12P48061 RNA5SP191-201ENST00000362585 102 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 RN7SKP153-201ENST00000365026 316 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 AC068538.1-201ENST00000376856 336 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 RNU1-74P-201ENST00000384108 171 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 HMGB3P7-201ENST00000400214 611 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.12□□□□□ -1.59
CXCL12P48061 CNOT7P1-201ENST00000429006 852 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 AL359265.2-201ENST00000434367 631 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 KRT8P51-201ENST00000438938 274 ntBASIC5.12□□□□□ -1.59
CXCL12P48061 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms