Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AP001962.1-201ENST00000624114 559 ntBASIC5.03□□□□□ -1.6
APOBEC1P41238 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.03□□□□□ -1.6
APOBEC1P41238 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.03□□□□□ -1.6
APOBEC1P41238 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOBEC1P41238 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
APOBEC1P41238 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOBEC1P41238 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.03□□□□□ -1.6
APOBEC1P41238 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOBEC1P41238 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOBEC1P41238 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.03□□□□□ -1.6
APOBEC1P41238 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
APOBEC1P41238 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
APOBEC1P41238 AC016745.2-201ENST00000608834 3443 ntBASIC5.03□□□□□ -1.6
APOBEC1P41238 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOBEC1P41238 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.03□□□□□ -1.6
APOBEC1P41238 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
APOBEC1P41238 ADAM24P-201ENST00000398655 2101 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC144833.1-201ENST00000567953 4089 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.02□□□□□ -1.61
APOBEC1P41238 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.02□□□□□ -1.61
APOBEC1P41238 CDC27P2-201ENST00000425026 1922 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 RNU4-27P-201ENST00000410889 139 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 VN1R37P-201ENST00000419096 748 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AL160175.1-201ENST00000428124 247 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 BX119904.1-201ENST00000432026 348 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC099670.2-201ENST00000435130 321 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC093716.1-201ENST00000435923 377 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 SUMO2P3-201ENST00000438311 288 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 RPL36AP39-201ENST00000445859 318 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 VDAC2P4-201ENST00000452925 711 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 RPL32P14-201ENST00000463196 378 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.02□□□□□ -1.61
APOBEC1P41238 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.02□□□□□ -1.61
APOBEC1P41238 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.02□□□□□ -1.61
APOBEC1P41238 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AP000619.2-201ENST00000546014 969 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.02□□□□□ -1.61
APOBEC1P41238 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AC087888.1-201ENST00000550884 1254 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC023158.1-201ENST00000561632 1025 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AC084373.1-201ENST00000603311 235 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC005034.4-201ENST00000603612 899 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AF129408.1-201ENST00000608767 431 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AC022960.3-201ENST00000619794 441 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 uc_338.7-201ENST00000621834 124 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AP000550.3-201ENST00000637734 379 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.02□□□□□ -1.61
APOBEC1P41238 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.02□□□□□ -1.61
APOBEC1P41238 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.02□□□□□ -1.61
APOBEC1P41238 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.02□□□□□ -1.61
APOBEC1P41238 GVINP1-202ENST00000531871 7271 ntBASIC5.02□□□□□ -1.61
APOBEC1P41238 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.02□□□□□ -1.61
APOBEC1P41238 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.02□□□□□ -1.61
APOBEC1P41238 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
APOBEC1P41238 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.01□□□□□ -1.61
APOBEC1P41238 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
APOBEC1P41238 AC107021.2-201ENST00000567714 2095 ntBASIC5.01□□□□□ -1.61
APOBEC1P41238 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
APOBEC1P41238 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOBEC1P41238 CASC19-261ENST00000641853 1638 ntBASIC5.01□□□□□ -1.61
APOBEC1P41238 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.01□□□□□ -1.61
APOBEC1P41238 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.01□□□□□ -1.61
APOBEC1P41238 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
APOBEC1P41238 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
APOBEC1P41238 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOBEC1P41238 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
APOBEC1P41238 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
APOBEC1P41238 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 1019.6 ms