Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXC13P31276 RPS21P4-201ENST00000487122 248 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 IGLV2-34-201ENST00000490007 283 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC13P31276 RPEP1-201ENST00000504507 658 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 AC021106.1-201ENST00000509020 1058 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC13P31276 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXC13P31276 SNORA70.17-201ENST00000516449 133 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC13P31276 OR8Q1P-201ENST00000526467 655 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.73□□□□□ -1.49
HOXC13P31276 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HOXC13P31276 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC13P31276 AC012616.1-201ENST00000600294 197 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 AC018809.2-201ENST00000602436 3823 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 AC079791.1-201ENST00000605356 973 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 AL356274.1-201ENST00000617064 410 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC13P31276 MIR6810-201ENST00000622701 70 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC13P31276 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
HOXC13P31276 AL078621.3-201ENST00000623707 2042 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HOXC13P31276 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC13P31276 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC13P31276 SMG1P6-201ENST00000532337 2930 ntBASIC5.73□□□□□ -1.49
HOXC13P31276 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HOXC13P31276 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HOXC13P31276 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
HOXC13P31276 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
HOXC13P31276 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC13P31276 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXC13P31276 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HOXC13P31276 AC068870.1-201ENST00000563737 2455 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
HOXC13P31276 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 RNU4-2-201ENST00000365668 141 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HOXC13P31276 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 AL139039.2-201ENST00000407436 479 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HOXC13P31276 RPS26P13-201ENST00000419030 330 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 Z85994.2-201ENST00000434327 452 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 MTND2P2-201ENST00000434633 945 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC13P31276 AC243772.1-201ENST00000451620 410 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 RPL7P45-201ENST00000455851 743 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 AC104629.2-201ENST00000468627 598 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC13P31276 AC093827.1-201ENST00000480094 861 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC13P31276 ATG10-AS1-201ENST00000504846 648 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC13P31276 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.72□□□□□ -1.49
HOXC13P31276 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
HOXC13P31276 RFPL4AP5-201ENST00000514977 504 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC13P31276 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC13P31276 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC13P31276 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC13P31276 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXC13P31276 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HOXC13P31276 AC087565.3-202ENST00000642085 1603 ntBASIC5.72□□□□□ -1.49
HOXC13P31276 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HOXC13P31276 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC13P31276 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC13P31276 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC13P31276 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.71□□□□□ -1.49
HOXC13P31276 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC13P31276 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
HOXC13P31276 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
HOXC13P31276 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC13P31276 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC13P31276 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC13P31276 AC114774.1-201ENST00000507410 1770 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HOXC13P31276 RN7SKP185-201ENST00000362813 326 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 BMS1P3-201ENST00000372011 932 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXC13P31276 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 RNU2-50P-201ENST00000410494 143 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC13P31276 SLC35E1P1-201ENST00000419313 864 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC13P31276 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms