Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC127381.1-201ENST00000555979 939 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC005341.1-201ENST00000571086 708 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 SUMO2P15-201ENST00000604285 278 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC007204.2-201ENST00000615022 616 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 MTCO1P1-201ENST00000624263 1081 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC025574.1-201ENST00000554784 1653 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 FGG-205ENST00000407946 1636 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC114947.2-201ENST00000565748 2125 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 LINC01963-201ENST00000562038 3148 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 RBPJP2-201ENST00000618187 1444 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 AL731566.1-201ENST00000620490 1937 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 RNA5SP223-201ENST00000365174 120 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 MIR105-1-201ENST00000385222 81 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 SNORA48.4-201ENST00000391089 134 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC009804.1-201ENST00000400949 179 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 EIF1P7-201ENST00000487533 337 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC022133.1-201ENST00000490961 571 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC090638.1-201ENST00000498296 909 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 BLZF2P-201ENST00000553776 1130 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC007448.1-201ENST00000582714 234 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 SUGT1P3-202ENST00000604259 383 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 SDR42E1P1-201ENST00000611327 477 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 MIR6837-201ENST00000620884 64 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 CCL14-204ENST00000622526 472 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 SAMMSON-209ENST00000641222 1100 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC023421.1-201ENST00000590535 1785 ntBASIC3.98□□□□□ -1.77
HLA-DMBP28068 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DMBP28068 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMBP28068 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC022417.1-201ENST00000624768 1303 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AP001642.1-201ENST00000624727 2117 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 RN7SKP153-201ENST00000365026 316 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms